RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 PTPRCAPQ14761 206 aa17.84■□□□□ 0.45
CIRBP-227ENST00000590188 COL28A1Q2UY09 1125 aa17.84■□□□□ 0.45
CIRBP-227ENST00000590188 ZNF761Q86XN6 746 aaPredicted RBP17.84■□□□□ 0.45
CIRBP-227ENST00000590188 TAB3Q8N5C8 712 aaPredicted RBP17.84■□□□□ 0.45
CIRBP-227ENST00000590188 GDAP1Q8TB36 358 aa17.84■□□□□ 0.45
CIRBP-227ENST00000590188 GLYATL1Q969I3 302 aa17.84■□□□□ 0.45
CIRBP-227ENST00000590188 HES6Q96HZ4 224 aa17.84■□□□□ 0.45
CIRBP-227ENST00000590188 SPATA13Q96N96 652 aa17.84■□□□□ 0.45
CIRBP-227ENST00000590188 SRPK1Q96SB4 655 aaKnown RBP17.84■□□□□ 0.45
CIRBP-227ENST00000590188 TSGA10Q9BZW7 698 aa17.84■□□□□ 0.45
CIRBP-227ENST00000590188 POLR1BQ9H9Y6 1135 aa17.84■□□□□ 0.45
CIRBP-227ENST00000590188 APPL1Q9UKG1 709 aa17.84■□□□□ 0.45
CIRBP-227ENST00000590188 ARHGEF17Q96PE2 2063 aaPredicted RBP17.84■□□□□ 0.45
CIRBP-227ENST00000590188 ARHGAP6O43182 974 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 KRT86O43790 486 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 NUDT21O43809 227 aaKnown RBP17.83■□□□□ 0.44
CIRBP-227ENST00000590188 NUAK1O60285 661 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 ANXA9O76027 345 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 EPOP01588 193 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 ACTN2P35609 894 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 PPM1FP49593 454 aaPredicted RBP17.83■□□□□ 0.44
CIRBP-227ENST00000590188 INHBCP55103 352 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 B4GALNT1Q00973 533 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 CCDC173Q0VFZ6 552 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 PRPSAP1Q14558 356 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 TBC1D25Q3MII6 688 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 ATP13A5Q4VNC0 1218 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 KHDC1Q4VXA5 237 aaKnown RBP17.83■□□□□ 0.44
CIRBP-227ENST00000590188 FAM151BQ6UXP7 276 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 TMPRSS9Q7Z410 1059 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 ADGRG6Q86SQ4 1221 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 C17orf82Q86X59 251 aaPredicted RBP17.83■□□□□ 0.44
CIRBP-227ENST00000590188 PHYKPLQ8IUZ5 450 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 RNF10Q8N5U6 811 aaKnown RBP17.83■□□□□ 0.44
CIRBP-227ENST00000590188 FAM71DQ8N9W8 422 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 CARD9Q9H257 536 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 TRABDQ9H4I3 376 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 RDH14Q9HBH5 336 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 LZTFL1Q9NQ48 299 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 TMPRSS11EQ9UL52 423 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 LHX6Q9UPM6 363 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 ARL5AQ9Y689 179 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 CELSR3Q9NYQ7 3312 aa17.83■□□□□ 0.44
CIRBP-227ENST00000590188 SCN8AQ9UQD0 1980 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 DMXL2Q8TDJ6 3036 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 PPM1DO15297 605 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 B4GAT1O43505 415 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 HGFP14210 728 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 ITPKBP27987 946 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 CA5AP35218 305 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 HMGCLP35914 325 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 SPAM1P38567 509 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 LSSP48449 732 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 GDF10P55107 478 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 KLF1Q13351 362 aaPredicted RBP17.82■□□□□ 0.44
CIRBP-227ENST00000590188 LRP8Q14114 963 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 CHRNA6Q15825 494 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 MAP9Q49MG5 647 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 SEL1L2Q5TEA6 688 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 NKAIN2Q5VXU1 208 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 USP53Q70EK8 1073 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 TTC13Q8NBP0 860 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 ATG4AQ8WYN0 398 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 FGF11Q92914 225 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 CRELD1Q96HD1 420 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 OSGEPL1Q9H4B0 414 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 TRIM39Q9HCM9 518 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 HACD3Q9P035 362 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 IL17CQ9P0M4 197 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 NFKBIL1Q9UBC1 381 aaPredicted RBP17.82■□□□□ 0.44
CIRBP-227ENST00000590188 TBC1D29Q9UFV1 150 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 DNAJC16Q9Y2G8 782 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 APC2O95996 2303 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 LAMA5O15230 3695 aa17.82■□□□□ 0.44
CIRBP-227ENST00000590188 CCDC187A0A096LP49 1063 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 UGT1A9O60656 530 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 PNLIPP16233 465 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 UGT1A6P19224 532 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 UGT1A1P22309 533 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 UGT1A4P22310 534 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 RBMS1P29558 406 aaKnown RBP17.81■□□□□ 0.44
CIRBP-227ENST00000590188 ADRA1AP35348 466 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 UGT1A3P35503 534 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 UGT1A5P35504 534 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 EIF2S3P41091 472 aaKnown RBP17.81■□□□□ 0.44
CIRBP-227ENST00000590188 PEX6Q13608 980 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 INSCQ1MX18 579 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 PDPK2PQ6A1A2 396 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 ARHGEF18Q6ZSZ5 1173 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 CCDC112Q8NEF3 446 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 WDR36Q8NI36 951 aaKnown RBP17.81■□□□□ 0.44
CIRBP-227ENST00000590188 SLC37A2Q8TED4 501 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 PLEKHG4BQ96PX9 1271 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 TBL1YQ9BQ87 522 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 TMEM121Q9BTD3 319 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 ZMYND15Q9H091 742 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 RMI1Q9H9A7 625 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 UGT1A7Q9HAW7 530 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 UGT1A10Q9HAW8 530 aa17.81■□□□□ 0.44
CIRBP-227ENST00000590188 UGT1A8Q9HAW9 530 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms