RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 GIPC1O14908 333 aa21.1■□□□□ 0.97
ATG4D-212ENST00000590096 SIGLEC6O43699 453 aa21.1■□□□□ 0.97
ATG4D-212ENST00000590096 SRP72O76094 671 aaKnown RBP21.1■□□□□ 0.97
ATG4D-212ENST00000590096 ITGALP20701 1170 aa21.1■□□□□ 0.97
ATG4D-212ENST00000590096 ADRA1DP25100 572 aa21.1■□□□□ 0.97
ATG4D-212ENST00000590096 PTGIRP43119 386 aa21.1■□□□□ 0.97
ATG4D-212ENST00000590096 NPY2RP49146 381 aa21.1■□□□□ 0.97
ATG4D-212ENST00000590096 DEFB133Q30KQ1 61 aa21.1■□□□□ 0.97
ATG4D-212ENST00000590096 NLRP9Q7RTR0 991 aa21.1■□□□□ 0.97
ATG4D-212ENST00000590096 TAF8Q7Z7C8 310 aa21.1■□□□□ 0.97
ATG4D-212ENST00000590096 SCARF2Q96GP6 870 aaPredicted RBP21.1■□□□□ 0.97
ATG4D-212ENST00000590096 CNDP2Q96KP4 475 aaKnown RBP21.1■□□□□ 0.97
ATG4D-212ENST00000590096 OR2M4Q96R27 311 aa21.1■□□□□ 0.97
ATG4D-212ENST00000590096 KRT12Q99456 494 aa21.1■□□□□ 0.97
ATG4D-212ENST00000590096 OR2AG1Q9H205 316 aa21.1■□□□□ 0.97
ATG4D-212ENST00000590096 ASB8Q9H765 288 aa21.1■□□□□ 0.97
ATG4D-212ENST00000590096 RMI1Q9H9A7 625 aa21.1■□□□□ 0.97
ATG4D-212ENST00000590096 TRNAU1APQ9NX07 287 aaKnown RBP21.1■□□□□ 0.97
ATG4D-212ENST00000590096 SLC30A1Q9Y6M5 507 aa21.1■□□□□ 0.97
ATG4D-212ENST00000590096 CCDC78A2IDD5 438 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 GPR89AB7ZAQ6 455 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 CCL22O00626 93 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 TRIM38O00635 465 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 YY2O15391 372 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 UGT1A9O60656 530 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 URI1O94763 535 aaPredicted RBP21.09■□□□□ 0.97
ATG4D-212ENST00000590096 FUCA1P04066 466 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 CELA2BP08218 269 aaPredicted RBP21.09■□□□□ 0.97
ATG4D-212ENST00000590096 GPR89BP0CG08 455 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 UGT1A6P19224 532 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 UGT1A1P22309 533 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 UGT1A4P22310 534 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 UGT1A3P35503 534 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 UGT1A5P35504 534 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 SIM1P81133 766 aaPredicted RBP21.09■□□□□ 0.97
ATG4D-212ENST00000590096 ILF3Q12906 894 aaKnown RBP eCLIP21.09■□□□□ 0.97
ATG4D-212ENST00000590096 DHX34Q14147 1143 aaKnown RBP21.09■□□□□ 0.97
ATG4D-212ENST00000590096 PCID2Q5JVF3 399 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 LDLRAP1Q5SW96 308 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 ZNF648Q5T619 568 aaPredicted RBP21.09■□□□□ 0.97
ATG4D-212ENST00000590096 ANKRD22Q5VYY1 191 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 JAMLQ86YT9 394 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 PPIL6Q8IXY8 311 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 SPATA4Q8NEY3 305 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 PTCD2Q8WV60 388 aaKnown RBP21.09■□□□□ 0.97
ATG4D-212ENST00000590096 TTC25Q96NG3 672 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 GSDMCQ9BYG8 508 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 ZCCHC2Q9C0B9 1178 aaKnown RBP21.09■□□□□ 0.97
ATG4D-212ENST00000590096 IL22Q9GZX6 179 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 UGT1A7Q9HAW7 530 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 UGT1A10Q9HAW8 530 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 UGT1A8Q9HAW9 530 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 SMOXQ9NWM0 555 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 ATXN10Q9UBB4 475 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 ZNHIT2Q9UHR6 403 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 CRLS1Q9UJA2 301 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 TCAF1Q9Y4C2 921 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 EPG5Q9HCE0 2579 aa21.09■□□□□ 0.97
ATG4D-212ENST00000590096 ARID1BQ8NFD5 2236 aaPredicted RBP21.09■□□□□ 0.97
ATG4D-212ENST00000590096 SPAARA0A1B0GVQ0 90 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 H7C0S8 307 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 GPR39O43194 453 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 TNFSF14O43557 240 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 VEGFDO43915 354 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 DNAJC6O75061 913 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 MTX2O75431 263 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 TMEM63AO94886 807 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 GIMD1P0DJR0 217 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 MC4RP32245 332 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 XIAPP98170 497 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 CKAP4Q07065 602 aaKnown RBP21.08■□□□□ 0.97
ATG4D-212ENST00000590096 NFATC2Q13469 925 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 PEX6Q13608 980 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 GTF2H3Q13889 308 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 PYCR3Q53H96 274 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 TSTD2Q5T7W7 516 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 ZCCHC8Q6NZY4 707 aaKnown RBP21.08■□□□□ 0.97
ATG4D-212ENST00000590096 LVRNQ6Q4G3 990 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 SNX20Q7Z614 316 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 PCGF5Q86SE9 256 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 ADGRG6Q86SQ4 1221 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 GLRX5Q86SX6 157 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 MCUQ8NE86 351 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 GLMNQ92990 594 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 ULK4Q96C45 1275 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 CDKN2AIPNLQ96HQ2 116 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 XAB2Q9HCS7 855 aaKnown RBP21.08■□□□□ 0.97
ATG4D-212ENST00000590096 EVA1BQ9NVM1 165 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 CDC23Q9UJX2 597 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 TMPRSS11EQ9UL52 423 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 RIMKLBQ9ULI2 386 aa21.08■□□□□ 0.97
ATG4D-212ENST00000590096 DNALI1O14645 258 aaPredicted RBP21.07■□□□□ 0.96
ATG4D-212ENST00000590096 TTI1O43156 1089 aa21.07■□□□□ 0.96
ATG4D-212ENST00000590096 NUAK1O60285 661 aa21.07■□□□□ 0.96
ATG4D-212ENST00000590096 CDK14O94921 469 aa21.07■□□□□ 0.96
ATG4D-212ENST00000590096 ZNF8P17098 575 aaPredicted RBP21.07■□□□□ 0.96
ATG4D-212ENST00000590096 MGAT1P26572 445 aa21.07■□□□□ 0.96
ATG4D-212ENST00000590096 DAB2P98082 770 aa21.07■□□□□ 0.96
ATG4D-212ENST00000590096 LRP8Q14114 963 aa21.07■□□□□ 0.96
ATG4D-212ENST00000590096 ZRANB3Q5FWF4 1079 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms