RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 ABCG8Q9H221 673 aa17.31■□□□□ 0.36
CXXC1-212ENST00000589940 P2RY12Q9H244 342 aa17.31■□□□□ 0.36
CXXC1-212ENST00000589940 FBXL12Q9NXK8 326 aa17.31■□□□□ 0.36
CXXC1-212ENST00000589940 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.31■□□□□ 0.36
CXXC1-212ENST00000589940 SLC17A7Q9P2U7 560 aa17.31■□□□□ 0.36
CXXC1-212ENST00000589940 FBXL21Q9UKT6 434 aa17.31■□□□□ 0.36
CXXC1-212ENST00000589940 GRID1Q9ULK0 1009 aa17.31■□□□□ 0.36
CXXC1-212ENST00000589940 MRPS17Q9Y2R5 130 aaKnown RBP17.31■□□□□ 0.36
CXXC1-212ENST00000589940 ACOT9Q9Y305 439 aa17.31■□□□□ 0.36
CXXC1-212ENST00000589940 PRMT5O14744 637 aaPredicted RBP17.31■□□□□ 0.36
CXXC1-212ENST00000589940 ASMTLO95671 621 aa17.31■□□□□ 0.36
CXXC1-212ENST00000589940 GSTA1P08263 222 aa17.31■□□□□ 0.36
CXXC1-212ENST00000589940 PGGT1BP53609 377 aa17.31■□□□□ 0.36
CXXC1-212ENST00000589940 AP2M1Q96CW1 435 aa17.31■□□□□ 0.36
CXXC1-212ENST00000589940 SIPA1Q96FS4 1042 aa17.31■□□□□ 0.36
CXXC1-212ENST00000589940 SHDQ96IW2 340 aa17.31■□□□□ 0.36
CXXC1-212ENST00000589940 C12orf65Q9H3J6 166 aaKnown RBP17.31■□□□□ 0.36
CXXC1-212ENST00000589940 COQ6Q9Y2Z9 468 aa17.31■□□□□ 0.36
CXXC1-212ENST00000589940 COMMD10Q9Y6G5 202 aa17.31■□□□□ 0.36
CXXC1-212ENST00000589940 KRBA1A5PL33 1030 aa17.3■□□□□ 0.36
CXXC1-212ENST00000589940 LZTS3O60299 673 aaPredicted RBP17.3■□□□□ 0.36
CXXC1-212ENST00000589940 RECQL5O94762 991 aaPredicted RBP17.3■□□□□ 0.36
CXXC1-212ENST00000589940 PKMP14618 531 aaKnown RBP17.3■□□□□ 0.36
CXXC1-212ENST00000589940 ETV4P43268 484 aa17.3■□□□□ 0.36
CXXC1-212ENST00000589940 IRF9Q00978 393 aa17.3■□□□□ 0.36
CXXC1-212ENST00000589940 LRRC32Q14392 662 aa17.3■□□□□ 0.36
CXXC1-212ENST00000589940 ITIH4Q14624 930 aa17.3■□□□□ 0.36
CXXC1-212ENST00000589940 CRY1Q16526 586 aa17.3■□□□□ 0.36
CXXC1-212ENST00000589940 TTC31Q49AM3 519 aaPredicted RBP17.3■□□□□ 0.36
CXXC1-212ENST00000589940 LVRNQ6Q4G3 990 aa17.3■□□□□ 0.36
CXXC1-212ENST00000589940 Q6ZS52 159 aa17.3■□□□□ 0.36
CXXC1-212ENST00000589940 ZNF765Q7L2R6 523 aa17.3■□□□□ 0.36
CXXC1-212ENST00000589940 CCDC91Q7Z6B0 441 aa17.3■□□□□ 0.36
CXXC1-212ENST00000589940 LCA5Q86VQ0 697 aa17.3■□□□□ 0.36
CXXC1-212ENST00000589940 GANCQ8TET4 914 aa17.3■□□□□ 0.36
CXXC1-212ENST00000589940 FAM111AQ96PZ2 611 aa17.3■□□□□ 0.36
CXXC1-212ENST00000589940 CLPBQ9H078 707 aa17.3■□□□□ 0.36
CXXC1-212ENST00000589940 PCDHB1Q9Y5F3 818 aa17.3■□□□□ 0.36
CXXC1-212ENST00000589940 PLXNA2O75051 1894 aa17.3■□□□□ 0.36
CXXC1-212ENST00000589940 A0A087X1B8 175 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 COL6A2P12110 1019 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 RPS3P23396 243 aaKnown RBP eCLIP17.29■□□□□ 0.36
CXXC1-212ENST00000589940 TARSP26639 723 aaKnown RBP17.29■□□□□ 0.36
CXXC1-212ENST00000589940 GMPRP36959 345 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 STARD6P59095 220 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 TIAL1Q01085 375 aaKnown RBP eCLIP17.29■□□□□ 0.36
CXXC1-212ENST00000589940 CTSL3PQ5NE16 218 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 HHATQ5VTY9 493 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 DYDC1Q8WWB3 177 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 NUS1Q96E22 293 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 MRGPRX1Q96LB2 322 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 COPS8Q99627 209 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 BOCQ9BWV1 1114 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 POPDC3Q9HBV1 291 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 GPAMQ9HCL2 828 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 ZDHHC3Q9NYG2 299 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 TAS2R13Q9NYV9 303 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 TMPRSS11EQ9UL52 423 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 SHOX2O60902 331 aaPredicted RBP17.29■□□□□ 0.36
CXXC1-212ENST00000589940 RHOBTB1O94844 696 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 GNGT1P63211 74 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 KYAT3Q6YP21 454 aaKnown RBP17.29■□□□□ 0.36
CXXC1-212ENST00000589940 PIM3Q86V86 326 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 PLD6Q8N2A8 252 aaKnown RBP17.29■□□□□ 0.36
CXXC1-212ENST00000589940 CCDC97Q96F63 343 aaPredicted RBP17.29■□□□□ 0.36
CXXC1-212ENST00000589940 PAIP2Q9BPZ3 127 aaKnown RBP17.29■□□□□ 0.36
CXXC1-212ENST00000589940 C1QTNF1Q9BXJ1 281 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 LMAN1LQ9HAT1 526 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 MED16Q9Y2X0 877 aa17.29■□□□□ 0.36
CXXC1-212ENST00000589940 IGLV3-16A0A075B6K0 115 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 TCRBV21S2A2A0A5A6 115 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 PCDH8O95206 1070 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 CD9P21926 228 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 NSG1P42857 185 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 IL9RQ01113 521 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 DPTQ07507 201 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 GPRC6AQ5T6X5 926 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 N4BP2L1Q5TBK1 243 aaPredicted RBP17.28■□□□□ 0.36
CXXC1-212ENST00000589940 USP30Q70CQ3 517 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 TAX1BP1Q86VP1 789 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 UBALD2Q8IYN6 164 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 CENPLQ8N0S6 344 aaPredicted RBP17.28■□□□□ 0.36
CXXC1-212ENST00000589940 GDAP1Q8TB36 358 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 KCNJ9Q92806 393 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 TSNARE1Q96NA8 513 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 VPS35Q96QK1 796 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 LTB4R2Q9NPC1 389 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 GNPTGQ9UJJ9 305 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 FZD4Q9ULV1 537 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 KANSL1LA0AUZ9 987 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 FADS2P1A8MWK0 482 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 CHURC1-FNTBB4DL54 471 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 PLRG1O43660 514 aaKnown RBP17.28■□□□□ 0.36
CXXC1-212ENST00000589940 WISP3O95389 354 aaPredicted RBP17.28■□□□□ 0.36
CXXC1-212ENST00000589940 DHRS4L1P0CG22 281 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 NDUFV2P19404 249 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 SLC26A3P40879 764 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 SFSWAPQ12872 951 aaKnown RBP17.28■□□□□ 0.36
CXXC1-212ENST00000589940 UBXN2BQ14CS0 331 aa17.28■□□□□ 0.36
CXXC1-212ENST00000589940 SETMARQ53H47 684 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms