RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 F8VZ95 297 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 THAP12O43422 761 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 MFAP3LO75121 409 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 GRAP2O75791 330 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 TMCC1O94876 653 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 DESP17661 470 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 GNA15P30679 374 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 CYLC1P35663 651 aaPredicted RBP6.03□□□□□ -1.44
VPS25-204ENST00000589577 SOX5P35711 763 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 MAPK9P45984 424 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 CXCR3P49682 368 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 SEPHS1P49903 392 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 SUOXP51687 545 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 EPHA4P54764 986 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 HHEXQ03014 270 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 KLHL30Q0D2K2 578 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 FOXD4Q12950 439 aaPredicted RBP6.03□□□□□ -1.44
VPS25-204ENST00000589577 NFATC2Q13469 925 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 ATP1A4Q13733 1029 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 POLD3Q15054 466 aaPredicted RBP6.03□□□□□ -1.44
VPS25-204ENST00000589577 HGSNATQ68CP4 663 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 LCN10Q6JVE6 187 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 PWWP2BQ6NUJ5 590 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 PNCKQ6P2M8 343 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 LIPIQ6XZB0 460 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 ZNF677Q86XU0 584 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 PARP9Q8IXQ6 854 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 ZNF808Q8N4W9 903 aaPredicted RBP6.03□□□□□ -1.44
VPS25-204ENST00000589577 ZBTB2Q8N680 514 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 ACBD4Q8NC06 268 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 FAR1Q8WVX9 515 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 SHC3Q92529 594 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 SYN2Q92777 582 aaPredicted RBP6.03□□□□□ -1.44
VPS25-204ENST00000589577 SCARF2Q96GP6 870 aaPredicted RBP6.03□□□□□ -1.44
VPS25-204ENST00000589577 GDAP1L1Q96MZ0 367 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 SMR3AQ99954 134 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 TBC1D10AQ9BXI6 508 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 NAA15Q9BXJ9 866 aaKnown RBP6.03□□□□□ -1.44
VPS25-204ENST00000589577 TEX101Q9BY14 249 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 TTYH3Q9C0H2 523 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 TKTL2Q9H0I9 626 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 ZNF552Q9H707 407 aaPredicted RBP6.03□□□□□ -1.44
VPS25-204ENST00000589577 SEMA3GQ9NS98 782 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 CAPN11Q9UMQ6 739 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 NEU3Q9UQ49 428 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 SLC17A4Q9Y2C5 497 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 ATP8A1Q9Y2Q0 1164 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 PCDHGB6Q9Y5F9 930 aa6.03□□□□□ -1.44
VPS25-204ENST00000589577 PCYT1BQ9Y5K3 369 aaPredicted RBP6.03□□□□□ -1.44
VPS25-204ENST00000589577 LRRC53A6NM62 1247 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 RASA4BC9J798 803 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 HAX1O00165 279 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 RASA4O43374 803 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 KIF1CO43896 1103 aaKnown RBP6.02□□□□□ -1.45
VPS25-204ENST00000589577 AKR1B10O60218 316 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 GFPT2O94808 682 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 MT-ND3P03897 115 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 GYPCP04921 128 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 SERPING1P05155 500 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 IVLP07476 585 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 TNFAIP3P21580 790 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 PBX1P40424 430 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 ACADSBP45954 432 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 PPM1FP49593 454 aaPredicted RBP6.02□□□□□ -1.45
VPS25-204ENST00000589577 KLK7P49862 253 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 VAV2P52735 878 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 KCNK10P57789 538 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 RPS15P62841 145 aaKnown RBP6.02□□□□□ -1.45
VPS25-204ENST00000589577 Q0VFX4 171 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 MTA1Q13330 715 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 SPA17Q15506 151 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 LYPLAL1Q5VWZ2 237 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 IZUMO3Q5VZ72 239 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 PLEKHA7Q6IQ23 1121 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 TRIM72Q6ZMU5 477 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 Q71RC1 249 aaPredicted RBP6.02□□□□□ -1.45
VPS25-204ENST00000589577 MED25Q71SY5 747 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 TAOK1Q7L7X3 1001 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 PPP1R3BQ86XI6 285 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 TMTC1Q8IUR5 882 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 ARHGEF19Q8IW93 802 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 TMEM102Q8N9M5 508 aaPredicted RBP6.02□□□□□ -1.45
VPS25-204ENST00000589577 SLC38A9Q8NBW4 561 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 LMO3Q8TAP4 145 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 FNIP1Q8TF40 1166 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 STK32AQ8WU08 396 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 NRGNQ92686 78 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 EXOC2Q96KP1 924 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 C1orf74Q96LT6 269 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 CCDC42Q96M95 316 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 TRAPPC9Q96Q05 1148 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 PANX2Q96RD6 677 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 TMEM121Q9BTD3 319 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 KLC2Q9H0B6 622 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 GANQ9H2C0 597 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 SYNCQ9H7C4 482 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 SARS2Q9NP81 518 aaKnown RBP6.02□□□□□ -1.45
VPS25-204ENST00000589577 ABHD10Q9NUJ1 306 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 LHX3Q9UBR4 397 aa6.02□□□□□ -1.45
VPS25-204ENST00000589577 G3BP2Q9UN86 482 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms