RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 AFTPHQ6ULP2 937 aa22.26■■□□□ 1.15
R3HDM4-205ENST00000589445 PHACTR4Q8IZ21 702 aa22.26■■□□□ 1.15
R3HDM4-205ENST00000589445 RBFAQ8N0V3 343 aa22.26■■□□□ 1.15
R3HDM4-205ENST00000589445 OTUD6BQ8N6M0 293 aa22.26■■□□□ 1.15
R3HDM4-205ENST00000589445 OR6P1Q8NGX9 317 aa22.26■■□□□ 1.15
R3HDM4-205ENST00000589445 OR1E3Q8WZA6 343 aa22.26■■□□□ 1.15
R3HDM4-205ENST00000589445 TSACCQ96A04 125 aaPredicted RBP22.26■■□□□ 1.15
R3HDM4-205ENST00000589445 TBATAQ96M53 351 aa22.26■■□□□ 1.15
R3HDM4-205ENST00000589445 CAAP1Q9H8G2 361 aa22.26■■□□□ 1.15
R3HDM4-205ENST00000589445 UGT1A7Q9HAW7 530 aa22.26■■□□□ 1.15
R3HDM4-205ENST00000589445 UGT1A10Q9HAW8 530 aa22.26■■□□□ 1.15
R3HDM4-205ENST00000589445 UGT1A8Q9HAW9 530 aa22.26■■□□□ 1.15
R3HDM4-205ENST00000589445 MRPL40Q9NQ50 206 aaKnown RBP22.26■■□□□ 1.15
R3HDM4-205ENST00000589445 APOBEC3BQ9UH17 382 aaKnown RBP22.26■■□□□ 1.15
R3HDM4-205ENST00000589445 DNAH14Q0VDD8 3507 aa22.26■■□□□ 1.15
R3HDM4-205ENST00000589445 PRSS38A1L453 326 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 CCDC162PA2VCL2 907 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 GDF9O60383 454 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 JUNDP17535 347 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 POLD2P49005 469 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 PLTPP55058 493 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 SRP54P61011 504 aaKnown RBP22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 XIAPP98170 497 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 PPARDQ03181 441 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 EIF2B5Q13144 721 aaKnown RBP22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 NFATC2Q13469 925 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 HP1BP3Q5SSJ5 553 aaPredicted RBP22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 TEX35Q5T0J7 233 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 AGGF1Q8N302 714 aaeCLIP22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 ZNF398Q8TD17 642 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 BTN2A2Q8WVV5 523 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 HDAC10Q969S8 669 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 CDKN2AIPNLQ96HQ2 116 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 COX14Q96I36 57 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 VPS35Q96QK1 796 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 KIFC1Q9BW19 673 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 ERVMER34-1Q9H9K5 563 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 MRM3Q9HC36 420 aaKnown RBP22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 CYP4F12Q9HCS2 524 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 CNOT6Q9ULM6 557 aaKnown RBP22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 CHMP2BQ9UQN3 213 aa22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 KMT2BQ9UMN6 2715 aaPredicted RBP22.25■■□□□ 1.15
R3HDM4-205ENST00000589445 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 RASGRP1O95267 797 aa22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 GOT2P00505 430 aaKnown RBP22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 HOXC4P09017 264 aaPredicted RBP22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 RHOXF2BP0C7M4 288 aa22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 PRSS56P0CW18 603 aa22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 NME1P15531 152 aaKnown RBP22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 GNPDA1P46926 289 aa22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 MSS51Q4VC12 460 aa22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 GPRC6AQ5T6X5 926 aa22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 KCTD16Q68DU8 428 aa22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 TAS2R42Q7RTR8 314 aa22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 SNX20Q7Z614 316 aa22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 ULK4Q96C45 1275 aa22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 MFSD3Q96ES6 412 aa22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 CFAP36Q96G28 342 aa22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 C19orf43Q9BQ61 176 aa22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 RHOXF2Q9BQY4 288 aa22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 SLC13A1Q9BZW2 595 aa22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 ZCCHC2Q9C0B9 1178 aaKnown RBP22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 OR2AG1Q9H205 316 aa22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 TCEAL2Q9H3H9 227 aaPredicted RBP22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 CARS2Q9HA77 564 aaKnown RBP22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 EPB41L5Q9HCM4 733 aa22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 SMOXQ9NWM0 555 aa22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 RIMKLBQ9ULI2 386 aa22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 PNMA8BQ9ULN7 279 aaPredicted RBP22.24■■□□□ 1.15
R3HDM4-205ENST00000589445 A0A1B0GTQ1 180 aa22.23■■□□□ 1.15
R3HDM4-205ENST00000589445 H7C0S8 307 aa22.23■■□□□ 1.15
R3HDM4-205ENST00000589445 TP73O15350 636 aa22.23■■□□□ 1.15
R3HDM4-205ENST00000589445 PAMP19021 973 aa22.23■■□□□ 1.15
R3HDM4-205ENST00000589445 EPHA8P29322 1005 aaPredicted RBP22.23■■□□□ 1.15
R3HDM4-205ENST00000589445 CACNG1Q06432 222 aa22.23■■□□□ 1.15
R3HDM4-205ENST00000589445 PDIA2Q13087 525 aaKnown RBP22.23■■□□□ 1.15
R3HDM4-205ENST00000589445 GTF2H3Q13889 308 aa22.23■■□□□ 1.15
R3HDM4-205ENST00000589445 TRADDQ15628 312 aa22.23■■□□□ 1.15
R3HDM4-205ENST00000589445 GLE1Q53GS7 698 aaKnown RBP22.23■■□□□ 1.15
R3HDM4-205ENST00000589445 CCDC25Q86WR0 208 aa22.23■■□□□ 1.15
R3HDM4-205ENST00000589445 ANKMY2Q8IV38 441 aa22.23■■□□□ 1.15
R3HDM4-205ENST00000589445 PEX13Q92968 403 aa22.23■■□□□ 1.15
R3HDM4-205ENST00000589445 TM7SF3Q9NS93 570 aa22.23■■□□□ 1.15
R3HDM4-205ENST00000589445 TREX1Q9NSU2 369 aa22.23■■□□□ 1.15
R3HDM4-205ENST00000589445 TMPRSS11EQ9UL52 423 aa22.23■■□□□ 1.15
R3HDM4-205ENST00000589445 RPS6KL1Q9Y6S9 549 aa22.23■■□□□ 1.15
R3HDM4-205ENST00000589445 ZFC3H1O60293 1989 aaKnown RBP22.23■■□□□ 1.15
R3HDM4-205ENST00000589445 TPRP12270 2363 aaKnown RBP22.23■■□□□ 1.15
R3HDM4-205ENST00000589445 KNL1Q8NG31 2342 aa22.22■■□□□ 1.15
R3HDM4-205ENST00000589445 FAM237BA0A1B0GVD1 139 aa22.22■■□□□ 1.15
R3HDM4-205ENST00000589445 YKT6O15498 198 aa22.22■■□□□ 1.15
R3HDM4-205ENST00000589445 DFNA5O60443 496 aa22.22■■□□□ 1.15
R3HDM4-205ENST00000589445 CSF2P04141 144 aa22.22■■□□□ 1.15
R3HDM4-205ENST00000589445 CEACAM5P06731 702 aa22.22■■□□□ 1.15
R3HDM4-205ENST00000589445 PGAM1P18669 254 aa22.22■■□□□ 1.15
R3HDM4-205ENST00000589445 CA5AP35218 305 aa22.22■■□□□ 1.15
R3HDM4-205ENST00000589445 HNRNPKP61978 463 aaKnown RBP eCLIP22.22■■□□□ 1.159e-10■■■■■ 58.8
R3HDM4-205ENST00000589445 CAV1Q03135 178 aa22.22■■□□□ 1.15
R3HDM4-205ENST00000589445 ACVR1Q04771 509 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms