RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 POLMQ9NP87 494 aaPredicted RBP7.37□□□□□ -1.23
ZNF540-206ENST00000589117 STARD7Q9NQZ5 370 aa7.37□□□□□ -1.23
ZNF540-206ENST00000589117 NLE1Q9NVX2 485 aaPredicted RBP7.37□□□□□ -1.23
ZNF540-206ENST00000589117 CACNA2D2Q9NY47 1150 aa7.37□□□□□ -1.23
ZNF540-206ENST00000589117 SARDHQ9UL12 918 aa7.37□□□□□ -1.23
ZNF540-206ENST00000589117 RNF112Q9ULX5 631 aa7.37□□□□□ -1.23
ZNF540-206ENST00000589117 AP4S1Q9Y587 144 aa7.37□□□□□ -1.23
ZNF540-206ENST00000589117 ARL5AQ9Y689 179 aa7.37□□□□□ -1.23
ZNF540-206ENST00000589117 COMMD10Q9Y6G5 202 aa7.37□□□□□ -1.23
ZNF540-206ENST00000589117 FNDC1Q4ZHG4 1894 aaPredicted RBP7.37□□□□□ -1.23
ZNF540-206ENST00000589117 PTPRDP23468 1912 aa7.37□□□□□ -1.23
ZNF540-206ENST00000589117 ILVBLA1L0T0 632 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 TYW5A2RUC4 315 aaKnown RBP7.36□□□□□ -1.23
ZNF540-206ENST00000589117 CCDC162PA2VCL2 907 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 FAM155AB1AL88 458 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-206ENST00000589117 AZIN1O14977 448 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 ANGPT2O15123 496 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 KDELR3O43731 214 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 GREM1O60565 184 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 KERAO60938 352 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 VPS26AO75436 327 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 ZDHHC11BP0C7U3 371 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 PIM1P11309 404 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-206ENST00000589117 ELNP15502 786 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 SELPP16109 830 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 TCN1P20061 433 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-206ENST00000589117 KCNA5P22460 613 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 ACVRL1P37023 503 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 SLC19A1P41440 591 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 RNF144AP50876 292 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-206ENST00000589117 SCNN1BP51168 640 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 C1QTNF8P60827 252 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 RHDQ02161 417 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 DUSP4Q13115 394 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 LRP8Q14114 963 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 PFKFB4Q16877 469 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 TYSND1Q2T9J0 566 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 C5orf22Q49AR2 442 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 RNF220Q5VTB9 566 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 FUT10Q6P4F1 479 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 LARP4Q71RC2 724 aaKnown RBP eCLIP7.36□□□□□ -1.23
ZNF540-206ENST00000589117 LRRC8DQ7L1W4 858 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 GLT6D1Q7Z4J2 308 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 MIER2Q8N344 545 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 PGBD5Q8N414 524 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 FBXO39Q8N4B4 442 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 MARVELD2Q8N4S9 558 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 PTGR2Q8N8N7 351 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-206ENST00000589117 SEPT8Q92599 483 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.36□□□□□ -1.23
ZNF540-206ENST00000589117 KIAA1191Q96A73 305 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 DCUN1D1Q96GG9 259 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 GCNAQ96QF7 691 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 TUBGCP5Q96RT8 1024 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 MGME1Q9BQP7 344 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 TMEM175Q9BSA9 504 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 AARSD1Q9BTE6 412 aaKnown RBP7.36□□□□□ -1.23
ZNF540-206ENST00000589117 COPS7BQ9H9Q2 264 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-206ENST00000589117 MID1IP1Q9NPA3 183 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 MARCH4Q9P2E8 410 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-206ENST00000589117 NLRC5Q86WI3 1866 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 SMIM31A0A1B0GVY4 71 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 LCHNA4D1U4 455 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 CAPN8A6NHC0 703 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 SLC38A8A6NNN8 435 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 ACOT8O14734 319 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 INSIG1O15503 277 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 AP1G1O43747 822 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 TNFAIP8O95379 198 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 WISP3O95389 354 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-206ENST00000589117 IDO1P14902 403 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 LBPP18428 481 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 LPOP22079 712 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-206ENST00000589117 GRIK2Q13002 908 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 LCP2Q13094 533 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 GALNT3Q14435 633 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 ADRM1Q16186 407 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 UNC50Q53HI1 259 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 HECTD3Q5T447 861 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 COL13A1Q5TAT6 717 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-206ENST00000589117 ANKS6Q68DC2 871 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 REP15Q6BDI9 236 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 RNF111Q6ZNA4 994 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 GK5Q6ZS86 529 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 SPATA19Q7Z5L4 167 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 LDB1Q86U70 411 aaPredicted RBP7.36□□□□□ -1.23
ZNF540-206ENST00000589117 DDIASQ8IXT1 998 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 RNF148Q8N7C7 305 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 RAET1EQ8TD07 263 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 TSPEARQ8WU66 669 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 HHIPL1Q96JK4 782 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 TTLL2Q9BWV7 592 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 GPR62Q9BZJ7 368 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 PDFQ9HBH1 243 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 VCX3AQ9NNX9 186 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 PCDHGA7Q9Y5G6 932 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 PCNTO95613 3336 aa7.36□□□□□ -1.23
ZNF540-206ENST00000589117 A0A1B0GVM2 712 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 OR51F1A6NGY5 319 aa7.35□□□□□ -1.23
ZNF540-206ENST00000589117 SUPT3HB4E1H0 165 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms