RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 CAPGP40121 348 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 GABARAPL2P60520 117 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 ZBTB46Q86UZ6 589 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 ATPAF2Q8N5M1 289 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 TWIST2Q8WVJ9 160 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 RSPH1Q8WYR4 309 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 FAM149B1Q96BN6 582 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 TMA16Q96EY4 203 aaKnown RBP13.34□□□□□ -0.27
KDM4B-208ENST00000589104 SLC39A3Q9BRY0 314 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 SEMA6AQ9H2E6 1030 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 CATSPERBQ9H7T0 1116 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 NANOGQ9H9S0 305 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 CARS2Q9HA77 564 aaKnown RBP13.34□□□□□ -0.27
KDM4B-208ENST00000589104 MAGEE1Q9HCI5 957 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 ZIM2Q9NZV7 527 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 E2F3O00716 465 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 ENO2P09104 434 aaPredicted RBP13.34□□□□□ -0.27
KDM4B-208ENST00000589104 STT3AP46977 705 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 STC1P52823 247 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 POLD3Q15054 466 aaPredicted RBP13.34□□□□□ -0.27
KDM4B-208ENST00000589104 TGFBIQ15582 683 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 SMAD1Q15797 465 aaKnown RBP13.34□□□□□ -0.27
KDM4B-208ENST00000589104 FAM110CQ1W6H9 321 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 PAGE3Q5JUK9 113 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 CLEC6AQ6EIG7 209 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 DEFB132Q7Z7B7 95 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 ZFAND4Q86XD8 727 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 CALHM3Q86XJ0 350 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 BRI3BPQ8WY22 251 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 PDLIM5Q96HC4 596 aaKnown RBP13.34□□□□□ -0.27
KDM4B-208ENST00000589104 SUSD3Q96L08 255 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 TMEM209Q96SK2 561 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 PTPN18Q99952 460 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 GABARAPL1Q9H0R8 117 aa13.34□□□□□ -0.27
KDM4B-208ENST00000589104 NLE1Q9NVX2 485 aaPredicted RBP13.34□□□□□ -0.27
KDM4B-208ENST00000589104 DHRS12A0PJE2 317 aa13.33□□□□□ -0.27
KDM4B-208ENST00000589104 LCHNA4D1U4 455 aa13.33□□□□□ -0.27
KDM4B-208ENST00000589104 GRIA3P42263 894 aa13.33□□□□□ -0.27
KDM4B-208ENST00000589104 HK3P52790 923 aa13.33□□□□□ -0.27
KDM4B-208ENST00000589104 PPP2R2BQ00005 443 aa13.33□□□□□ -0.27
KDM4B-208ENST00000589104 MRPL58Q14197 206 aaKnown RBP13.33□□□□□ -0.27
KDM4B-208ENST00000589104 ZNF829Q3KNS6 432 aaPredicted RBP13.33□□□□□ -0.27
KDM4B-208ENST00000589104 PIM3Q86V86 326 aa13.33□□□□□ -0.27
KDM4B-208ENST00000589104 CBR4Q8N4T8 237 aa13.33□□□□□ -0.27
KDM4B-208ENST00000589104 LEMD2Q8NC56 503 aa13.33□□□□□ -0.27
KDM4B-208ENST00000589104 C9orf16Q9BUW7 83 aa13.33□□□□□ -0.27
KDM4B-208ENST00000589104 FAM105AQ9NUU6 356 aa13.33□□□□□ -0.27
KDM4B-208ENST00000589104 RIC8BQ9NVN3 520 aa13.33□□□□□ -0.27
KDM4B-208ENST00000589104 TRIM17Q9Y577 477 aa13.33□□□□□ -0.27
KDM4B-208ENST00000589104 NUP210Q8TEM1 1887 aaPredicted RBP13.33□□□□□ -0.28
KDM4B-208ENST00000589104 M0QX08 132 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 PIP5K1BO14986 540 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 AXIN1O15169 862 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 HAPLN1P10915 354 aaPredicted RBP13.33□□□□□ -0.28
KDM4B-208ENST00000589104 NRIP1P48552 1158 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 NUP107P57740 925 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 TRIM71Q2Q1W2 868 aaKnown RBP13.33□□□□□ -0.28
KDM4B-208ENST00000589104 MS4A13Q5J8X5 152 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 GPR158Q5T848 1215 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 RAB44Q7Z6P3 723 aaPredicted RBP13.33□□□□□ -0.28
KDM4B-208ENST00000589104 TFAP2DQ7Z6R9 452 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 CPA6Q8N4T0 437 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 FAM47BQ8NA70 645 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 PROKR1Q8TCW9 393 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 FUBP1Q96AE4 644 aaKnown RBP13.33□□□□□ -0.28
KDM4B-208ENST00000589104 MGME1Q9BQP7 344 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 FEM1AQ9BSK4 669 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 CACNG4Q9UBN1 327 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 CDC14AQ9UNH5 594 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 PTGDR2Q9Y5Y4 395 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 DOCK3Q8IZD9 2030 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 UBXN8O00124 270 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 DYNC1LI2O43237 492 aaPredicted RBP13.33□□□□□ -0.28
KDM4B-208ENST00000589104 CSPG5O95196 566 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 MBL2P11226 248 aaPredicted RBP13.33□□□□□ -0.28
KDM4B-208ENST00000589104 PORP16435 677 aaPredicted RBP13.33□□□□□ -0.28
KDM4B-208ENST00000589104 CSHL1Q14406 222 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 NANOGP8Q6NSW7 305 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 EDEM1Q92611 657 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 SPATA17Q96L03 361 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 P2RY12Q9H244 342 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 CCDC167Q9P0B6 97 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 DNAH12Q6ZR08 3092 aa13.33□□□□□ -0.28
KDM4B-208ENST00000589104 PTPN6P29350 595 aa13.32□□□□□ -0.28
KDM4B-208ENST00000589104 GSK3BP49841 420 aa13.32□□□□□ -0.28
KDM4B-208ENST00000589104 IL10RBQ08334 325 aa13.32□□□□□ -0.28
KDM4B-208ENST00000589104 ZNF773Q6PK81 442 aa13.32□□□□□ -0.28
KDM4B-208ENST00000589104 TRAF7Q6Q0C0 670 aa13.32□□□□□ -0.28
KDM4B-208ENST00000589104 CPNE9Q8IYJ1 553 aa13.32□□□□□ -0.28
KDM4B-208ENST00000589104 PGBD3Q8N328 593 aa13.32□□□□□ -0.28
KDM4B-208ENST00000589104 GALNT4Q8N4A0 578 aa13.32□□□□□ -0.28
KDM4B-208ENST00000589104 SLC22A17Q8WUG5 538 aa13.32□□□□□ -0.28
KDM4B-208ENST00000589104 BCL7BQ9BQE9 202 aa13.32□□□□□ -0.28
KDM4B-208ENST00000589104 CLEC11AQ9Y240 323 aa13.32□□□□□ -0.28
KDM4B-208ENST00000589104 ZNF839A8K0R7 811 aa13.32□□□□□ -0.28
KDM4B-208ENST00000589104 EIF3FO00303 357 aaPredicted RBP13.32□□□□□ -0.28
KDM4B-208ENST00000589104 PDHXO00330 501 aa13.32□□□□□ -0.28
KDM4B-208ENST00000589104 TBC1D4O60343 1298 aa13.32□□□□□ -0.28
KDM4B-208ENST00000589104 MGEA5O60502 916 aa13.32□□□□□ -0.28
KDM4B-208ENST00000589104 FCGR1AP12314 374 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms