RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 TRIM49CP0CI26 452 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 CEBPBP17676 345 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 FCARP24071 287 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 CCNE1P24864 410 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 EPHA3P29320 983 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 OR1D2P34982 312 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 KCNC1P48547 511 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 TAF6P49848 677 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 ARPP19P56211 112 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 SHC2P98077 582 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 BFSP1Q12934 665 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 PDCLQ13371 301 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 STIM1Q13586 685 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 ACOX1Q15067 660 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 NFIL3Q16649 462 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 EDRF1Q3B7T1 1238 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 CD300EQ496F6 205 aaPredicted RBP7.92□□□□□ -1.14
ATG4D-210ENST00000588972 CTXN3Q4LDR2 81 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 C1orf220Q5T0J3 134 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 ICE2Q659A1 982 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 ITPRIPL1Q6GPH6 555 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 CENPPQ6IPU0 288 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 RINLQ6ZS11 566 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 HTR3DQ70Z44 454 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 TRAPPC11Q7Z392 1133 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 ADGRG5Q8IZF4 528 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 FUKQ8N0W3 1084 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 FSTL5Q8N475 847 aaPredicted RBP7.92□□□□□ -1.14
ATG4D-210ENST00000588972 ANKRD52Q8NB46 1076 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 CACTINQ8WUQ7 758 aaKnown RBP7.92□□□□□ -1.14
ATG4D-210ENST00000588972 TMEM174Q8WUU8 243 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 NELFBQ8WX92 580 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 SENP8Q96LD8 212 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 ZNF560Q96MR9 790 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 HAPLN3Q96S86 360 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 TSG101Q99816 390 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 PLA2G2FQ9BZM2 168 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 MMRN2Q9H8L6 949 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 ZFP14Q9HCL3 533 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 TRPV5Q9NQA5 729 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 ITGA11Q9UKX5 1188 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 FRMD4BQ9Y2L6 1034 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 PIAS3Q9Y6X2 628 aa7.92□□□□□ -1.14
ATG4D-210ENST00000588972 GREB1Q4ZG55 1949 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 LAMA5O15230 3695 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 ARHGEF37A1IGU5 675 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 KPNA7A9QM74 516 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 F5H697 171 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 CYB561D2O14569 222 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 SYN3O14994 580 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 CETN3O15182 167 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 HCRTO43612 131 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 ERN1O75460 977 aaKnown RBP7.91□□□□□ -1.14
ATG4D-210ENST00000588972 PAPSS2O95340 614 aaPredicted RBP7.91□□□□□ -1.14
ATG4D-210ENST00000588972 VNN1O95497 513 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 ELANEP08246 267 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 OR4Q2P0C623 313 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 ODC1P11926 461 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 CNR2P34972 360 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 PSMC2P35998 433 aaKnown RBP7.91□□□□□ -1.14
ATG4D-210ENST00000588972 CXCL12P48061 93 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 LIMK1P53667 647 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 RBP5P82980 135 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 ROR1Q01973 937 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 LRRC63Q05C16 580 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 MYBPC2Q14324 1141 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 HLXQ14774 488 aaPredicted RBP7.91□□□□□ -1.14
ATG4D-210ENST00000588972 DPCR1Q3MIW9 517 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 PREPLQ4J6C6 727 aaPredicted RBP7.91□□□□□ -1.14
ATG4D-210ENST00000588972 PDCD4Q53EL6 469 aaKnown RBP7.91□□□□□ -1.14
ATG4D-210ENST00000588972 TMEM196Q5HYL7 178 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 DEPDC1Q5TB30 811 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 WSCD1Q658N2 575 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 ZNF280DQ6N043 979 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 TTI2Q6NXR4 508 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 ZC3H3Q8IXZ2 948 aaKnown RBP7.91□□□□□ -1.14
ATG4D-210ENST00000588972 C11orf44Q8N8P7 122 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 TRIML1Q8N9V2 468 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 FAM3CQ92520 227 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 MSANTD3Q96H12 275 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 DHTKD1Q96HY7 919 aaPredicted RBP7.91□□□□□ -1.14
ATG4D-210ENST00000588972 OSBPL9Q96SU4 736 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 MNTQ99583 582 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 TRMT61BQ9BVS5 477 aaKnown RBP7.91□□□□□ -1.14
ATG4D-210ENST00000588972 FBXL5Q9UKA1 691 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 CHST2Q9Y4C5 530 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 SPAG17Q6Q759 2223 aa7.91□□□□□ -1.14
ATG4D-210ENST00000588972 WDR27A2RRH5 827 aa7.9□□□□□ -1.14
ATG4D-210ENST00000588972 PGPEP1LA6NFU8 196 aa7.9□□□□□ -1.14
ATG4D-210ENST00000588972 SLC38A8A6NNN8 435 aa7.9□□□□□ -1.14
ATG4D-210ENST00000588972 DIRC3C9JPN6 131 aa7.9□□□□□ -1.14
ATG4D-210ENST00000588972 ZNF197O14709 1029 aa7.9□□□□□ -1.14
ATG4D-210ENST00000588972 MAPK13O15264 365 aa7.9□□□□□ -1.14
ATG4D-210ENST00000588972 SLC16A3O15427 465 aaKnown RBP7.9□□□□□ -1.14
ATG4D-210ENST00000588972 TSPAN3O60637 253 aa7.9□□□□□ -1.14
ATG4D-210ENST00000588972 MBD3O95983 291 aa7.9□□□□□ -1.14
ATG4D-210ENST00000588972 EPB41P11171 864 aaKnown RBP7.9□□□□□ -1.14
ATG4D-210ENST00000588972 KRT13P13646 458 aa7.9□□□□□ -1.14
ATG4D-210ENST00000588972 PTPN2P17706 415 aa7.9□□□□□ -1.14
ATG4D-210ENST00000588972 PSMC3P17980 439 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms