RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 FSTL5Q8N475 847 aaPredicted RBP11.32□□□□□ -0.6
SMAD4-205ENST00000588745 ANKRD49Q8WVL7 239 aa11.32□□□□□ -0.6
SMAD4-205ENST00000588745 CCDC97Q96F63 343 aaPredicted RBP11.32□□□□□ -0.6
SMAD4-205ENST00000588745 UBXN10Q96LJ8 280 aa11.32□□□□□ -0.6
SMAD4-205ENST00000588745 GABRG3Q99928 467 aa11.32□□□□□ -0.6
SMAD4-205ENST00000588745 MRPL57Q9BQC6 102 aaKnown RBP11.32□□□□□ -0.6
SMAD4-205ENST00000588745 BOCQ9BWV1 1114 aa11.32□□□□□ -0.6
SMAD4-205ENST00000588745 HDAC8Q9BY41 377 aa11.32□□□□□ -0.6
SMAD4-205ENST00000588745 PITPNM3Q9BZ71 974 aa11.32□□□□□ -0.6
SMAD4-205ENST00000588745 CLPBQ9H078 707 aa11.32□□□□□ -0.6
SMAD4-205ENST00000588745 RSPH9Q9H1X1 276 aaPredicted RBP11.32□□□□□ -0.6
SMAD4-205ENST00000588745 MRPL46Q9H2W6 279 aaKnown RBP11.32□□□□□ -0.6
SMAD4-205ENST00000588745 FAM83DQ9H4H8 585 aa11.32□□□□□ -0.6
SMAD4-205ENST00000588745 SYTL2Q9HCH5 934 aa11.32□□□□□ -0.6
SMAD4-205ENST00000588745 SLCO1B3Q9NPD5 702 aa11.32□□□□□ -0.6
SMAD4-205ENST00000588745 HEBP1Q9NRV9 189 aa11.32□□□□□ -0.6
SMAD4-205ENST00000588745 SMOXQ9NWM0 555 aa11.32□□□□□ -0.6
SMAD4-205ENST00000588745 ZDHHC3Q9NYG2 299 aa11.32□□□□□ -0.6
SMAD4-205ENST00000588745 CD84Q9UIB8 345 aa11.32□□□□□ -0.6
SMAD4-205ENST00000588745 GNPTGQ9UJJ9 305 aa11.32□□□□□ -0.6
SMAD4-205ENST00000588745 FAM50BQ9Y247 325 aa11.32□□□□□ -0.6
SMAD4-205ENST00000588745 MTF2Q9Y483 593 aaPredicted RBP11.32□□□□□ -0.6
SMAD4-205ENST00000588745 OAS3Q9Y6K5 1087 aaKnown RBP11.32□□□□□ -0.6
SMAD4-205ENST00000588745 XIRP2A4UGR9 3374 aa11.32□□□□□ -0.6
SMAD4-205ENST00000588745 GOLGA8CPA6NN73 597 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 TARM1B6A8C7 271 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 PLK4O00444 970 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 RNASEH1O60930 286 aaKnown RBP11.31□□□□□ -0.6
SMAD4-205ENST00000588745 ADH1BP00325 375 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 EGFP01133 1207 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 SBK3P0C264 359 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 MYL2P10916 166 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 FGF3P11487 239 aaPredicted RBP11.31□□□□□ -0.6
SMAD4-205ENST00000588745 GM2AP17900 193 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 DRD1P21728 446 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 NTSR1P30989 418 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 LIG3P49916 1009 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 BST1Q10588 318 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 TMEM52BQ4KMG9 183 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 SETMARQ53H47 684 aaPredicted RBP11.31□□□□□ -0.6
SMAD4-205ENST00000588745 HENMT1Q5T8I9 393 aaKnown RBP11.31□□□□□ -0.6
SMAD4-205ENST00000588745 CGB2Q6NT52 195 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 ZYG11AQ6WRX3 759 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 Q6ZVL8 140 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 Q7L0L9 218 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 TECPR1Q7Z6L1 1165 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 PIGWQ7Z7B1 504 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 C10orf107Q8IVU9 208 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 SPNS2Q8IVW8 549 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 NRSN1Q8IZ57 195 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 SPATA6LQ8N4H0 392 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 TMEM151AQ8N4L1 468 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 TRAM1L1Q8N609 369 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 PPP1R14CQ8TAE6 165 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 CD200R1Q8TD46 325 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 KCNV2Q8TDN2 545 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 HLA-CQ95604 372 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 RAB7BQ96AH8 199 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 GRAMD1AQ96CP6 724 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 ERLEC1Q96DZ1 483 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 MSANTD3Q96H12 275 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 GPR21Q99679 349 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 TSSK1BQ9BXA7 367 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 SPATA16Q9BXB7 569 aa11.31□□□□□ -0.6
SMAD4-205ENST00000588745 UNKQ9C0B0 810 aaKnown RBP11.31□□□□□ -0.6
SMAD4-205ENST00000588745 CPSF2Q9P2I0 782 aaKnown RBP11.31□□□□□ -0.6
SMAD4-205ENST00000588745 TRMT6Q9UJA5 497 aaKnown RBP11.31□□□□□ -0.6
SMAD4-205ENST00000588745 IGLV3-16A0A075B6K0 115 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 E5RI56 91 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 H3BMM5 538 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 SNX3O60493 162 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 SYNCRIPO60506 623 aaKnown RBP11.3□□□□□ -0.6
SMAD4-205ENST00000588745 SNNO75324 88 aaPredicted RBP11.3□□□□□ -0.6
SMAD4-205ENST00000588745 SERPINE1P05121 402 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 ASGR2P07307 311 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 RBP1P09455 135 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 RALBP11234 206 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 CD1DP15813 335 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 P2RY2P41231 377 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 NSG1P42857 185 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 PFKPQ01813 784 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 SATB1Q01826 763 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 GRSF1Q12849 480 aaKnown RBP eCLIP11.3□□□□□ -0.6
SMAD4-205ENST00000588745 CNTN1Q12860 1018 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 STARD3Q14849 445 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 ACAP2Q15057 778 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 ACOX1Q15067 660 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 CST6Q15828 149 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 ZNF284Q2VY69 593 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 LEXMQ3ZCV2 418 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 PIP5KL1Q5T9C9 394 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 PRPF38BQ5VTL8 546 aaKnown RBP11.3□□□□□ -0.6
SMAD4-205ENST00000588745 ZNF776Q68DI1 518 aaPredicted RBP11.3□□□□□ -0.6
SMAD4-205ENST00000588745 PTRHD1Q6GMV3 140 aaKnown RBP11.3□□□□□ -0.6
SMAD4-205ENST00000588745 SDE2Q6IQ49 451 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 UGT3A1Q6NUS8 523 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 ZCCHC23Q6ZST2 131 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 OTOAQ7RTW8 1153 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 CYP2U1Q7Z449 544 aa11.3□□□□□ -0.6
SMAD4-205ENST00000588745 TRMT11Q7Z4G4 463 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms