RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 SEMA5AQ13591 1074 aa10□□□□□ -0.81
TPM4-207ENST00000588032 CHRNA6Q15825 494 aa10□□□□□ -0.81
TPM4-207ENST00000588032 ATP13A5Q4VNC0 1218 aa10□□□□□ -0.81
TPM4-207ENST00000588032 C14orf28Q4W4Y0 310 aa10□□□□□ -0.81
TPM4-207ENST00000588032 LDLRAP1Q5SW96 308 aa10□□□□□ -0.81
TPM4-207ENST00000588032 GUSBP11Q6P575 273 aa10□□□□□ -0.81
TPM4-207ENST00000588032 MARK2Q7KZI7 788 aaKnown RBP10□□□□□ -0.81
TPM4-207ENST00000588032 ADGRG6Q86SQ4 1221 aa10□□□□□ -0.81
TPM4-207ENST00000588032 NRROSQ86YC3 692 aa10□□□□□ -0.81
TPM4-207ENST00000588032 PRELID2Q8N945 189 aa10□□□□□ -0.81
TPM4-207ENST00000588032 OR4K2Q8NGD2 314 aa10□□□□□ -0.81
TPM4-207ENST00000588032 GDAP1Q8TB36 358 aa10□□□□□ -0.81
TPM4-207ENST00000588032 MAPK15Q8TD08 544 aa10□□□□□ -0.81
TPM4-207ENST00000588032 ZNF398Q8TD17 642 aa10□□□□□ -0.81
TPM4-207ENST00000588032 ACTRT1Q8TDG2 376 aa10□□□□□ -0.81
TPM4-207ENST00000588032 ZDHHC1Q8WTX9 485 aa10□□□□□ -0.81
TPM4-207ENST00000588032 OSBPL9Q96SU4 736 aa10□□□□□ -0.81
TPM4-207ENST00000588032 RAB6BQ9NRW1 208 aa10□□□□□ -0.81
TPM4-207ENST00000588032 SPATS2LQ9NUQ6 558 aaKnown RBP10□□□□□ -0.81
TPM4-207ENST00000588032 SMOXQ9NWM0 555 aa10□□□□□ -0.81
TPM4-207ENST00000588032 SIRPGQ9P1W8 387 aa10□□□□□ -0.81
TPM4-207ENST00000588032 METRNQ9UJH8 293 aa10□□□□□ -0.81
TPM4-207ENST00000588032 SNX12Q9UMY4 172 aa10□□□□□ -0.81
TPM4-207ENST00000588032 CLCA2Q9UQC9 943 aa10□□□□□ -0.81
TPM4-207ENST00000588032 DNMT3AQ9Y6K1 912 aaPredicted RBP10□□□□□ -0.81
TPM4-207ENST00000588032 CACNA1AO00555 2505 aa10□□□□□ -0.81
TPM4-207ENST00000588032 TDRD6O60522 2096 aaKnown RBP9.99□□□□□ -0.81
TPM4-207ENST00000588032 GOLGA6L10A0A0M3HER8 536 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 KLHL33A6NCF5 533 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 OR5K4A6NMS3 321 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 AGAP14A8MT82 685 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 B4DGG1 531 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 H7C0S8 307 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 PGRMC1O00264 195 aaKnown RBP9.99□□□□□ -0.81
TPM4-207ENST00000588032 KMOO15229 486 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 LDB2O43679 373 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 BUD23O43709 281 aaKnown RBP9.99□□□□□ -0.81
TPM4-207ENST00000588032 TCEA3O75764 348 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 SRP72O76094 671 aaKnown RBP9.99□□□□□ -0.81
TPM4-207ENST00000588032 MT-CO3P00414 261 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 MYF5P13349 255 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 SLC2A4P14672 509 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 ZNF8P17098 575 aaPredicted RBP9.99□□□□□ -0.81
TPM4-207ENST00000588032 AK4P27144 223 aaPredicted RBP9.99□□□□□ -0.81
TPM4-207ENST00000588032 RPL22P35268 128 aaKnown RBP9.99□□□□□ -0.81
TPM4-207ENST00000588032 ACTR1BP42025 376 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 ACTR1AP61163 376 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 CDK16Q00536 496 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 TMEM115Q12893 351 aaPredicted RBP9.99□□□□□ -0.81
TPM4-207ENST00000588032 OLIG2Q13516 323 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 GTF2H3Q13889 308 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 HLTFQ14527 1009 aaKnown RBP eCLIP9.99□□□□□ -0.81
TPM4-207ENST00000588032 TCEA2Q15560 299 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 CYP1B1Q16678 543 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 SKIDA1Q1XH10 827 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 GPR33Q49SQ1 333 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 CERCAMQ5T4B2 595 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 HES3Q5TGS1 186 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 CDCP2Q5VXM1 449 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 SLC30A9Q6PML9 568 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 FAM151BQ6UXP7 276 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 PPP1R21Q6ZMI0 780 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 CHST15Q7LFX5 561 aaPredicted RBP9.99□□□□□ -0.81
TPM4-207ENST00000588032 LRRTM4Q86VH4 590 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 C17orf82Q86X59 251 aaPredicted RBP9.99□□□□□ -0.81
TPM4-207ENST00000588032 DCBLD1Q8N8Z6 715 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 DNAAF3Q8N9W5 541 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 AVL9Q8NBF6 648 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 KYQ8NBH2 561 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 DDHD1Q8NEL9 900 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 STYXQ8WUJ0 223 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 PTCD2Q8WV60 388 aaKnown RBP9.99□□□□□ -0.81
TPM4-207ENST00000588032 HEXDCQ8WVB3 486 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 GATA6Q92908 595 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 MAGOHBQ96A72 148 aaKnown RBP9.99□□□□□ -0.81
TPM4-207ENST00000588032 ULK4Q96C45 1275 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 ZNF514Q96K75 400 aaPredicted RBP9.99□□□□□ -0.81
TPM4-207ENST00000588032 DEPDC7Q96QD5 511 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 OR2AG1Q9H205 316 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 ASB8Q9H765 288 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 SUDS3Q9H7L9 328 aaPredicted RBP9.99□□□□□ -0.81
TPM4-207ENST00000588032 EIF2B3Q9NR50 452 aaKnown RBP9.99□□□□□ -0.81
TPM4-207ENST00000588032 LRIT1Q9P2V4 623 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 TMPRSS11EQ9UL52 423 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 RIMKLBQ9ULI2 386 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 ARID1BQ8NFD5 2236 aaPredicted RBP9.99□□□□□ -0.81
TPM4-207ENST00000588032 DCHS1Q96JQ0 3298 aa9.99□□□□□ -0.81
TPM4-207ENST00000588032 LRP4O75096 1905 aa9.98□□□□□ -0.81
TPM4-207ENST00000588032 HEATR9A2RTY3 570 aa9.98□□□□□ -0.81
TPM4-207ENST00000588032 MROH6A6NGR9 719 aa9.98□□□□□ -0.81
TPM4-207ENST00000588032 TMX2-CTNND1H3BSU7 103 aa9.98□□□□□ -0.81
TPM4-207ENST00000588032 GAPDHSO14556 408 aaPredicted RBP9.98□□□□□ -0.81
TPM4-207ENST00000588032 UGT1A9O60656 530 aa9.98□□□□□ -0.81
TPM4-207ENST00000588032 PRAMEF1O95521 474 aa9.98□□□□□ -0.81
TPM4-207ENST00000588032 APRTP07741 180 aa9.98□□□□□ -0.81
TPM4-207ENST00000588032 RALBP11234 206 aa9.98□□□□□ -0.81
TPM4-207ENST00000588032 ETS1P14921 441 aa9.98□□□□□ -0.81
TPM4-207ENST00000588032 TPH1P17752 444 aa9.98□□□□□ -0.81
TPM4-207ENST00000588032 VCLP18206 1134 aa9.98□□□□□ -0.81
TPM4-207ENST00000588032 UGT1A6P19224 532 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms