RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 SCARF2Q96GP6 870 aaPredicted RBP18.99■□□□□ 0.63
DDX39A-204ENST00000586558 SIGLEC10Q96LC7 697 aa18.99■□□□□ 0.63
DDX39A-204ENST00000586558 ZNF778Q96MU6 729 aa18.99■□□□□ 0.63
DDX39A-204ENST00000586558 NAT9Q9BTE0 207 aa18.99■□□□□ 0.63
DDX39A-204ENST00000586558 RMI1Q9H9A7 625 aa18.99■□□□□ 0.63
DDX39A-204ENST00000586558 TRIM39Q9HCM9 518 aa18.99■□□□□ 0.63
DDX39A-204ENST00000586558 GRHL1Q9NZI5 618 aa18.99■□□□□ 0.63
DDX39A-204ENST00000586558 SLC2A6Q9UGQ3 507 aa18.99■□□□□ 0.63
DDX39A-204ENST00000586558 APOBEC3BQ9UH17 382 aaKnown RBP18.99■□□□□ 0.63
DDX39A-204ENST00000586558 TMPRSS11EQ9UL52 423 aa18.99■□□□□ 0.63
DDX39A-204ENST00000586558 ZNF106Q9H2Y7 1883 aaKnown RBP18.99■□□□□ 0.63
DDX39A-204ENST00000586558 TRBV5-4A0A0C4DH59 114 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 CCDC162PA2VCL2 907 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 CCL22O00626 93 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 GDF9O60383 454 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 UGT1A9O60656 530 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 PIAS2O75928 621 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 ASMTLO95671 621 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 PAMP19021 973 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 UGT1A6P19224 532 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 UGT1A1P22309 533 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 UGT1A4P22310 534 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 UGT1A3P35503 534 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 UGT1A5P35504 534 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 CBLBQ13191 982 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 SUZ12Q15022 739 aaKnown RBP18.98■□□□□ 0.63
DDX39A-204ENST00000586558 SHBQ15464 509 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 PRAMEF14Q5SWL7 426 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 DOK6Q6PKX4 331 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 HID1Q8IV36 788 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 NXPE1Q8N323 547 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 MPP5Q8N3R9 675 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 GDAP1Q8TB36 358 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 HEXDCQ8WVB3 486 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 HDAC10Q969S8 669 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.98■□□□□ 0.63
DDX39A-204ENST00000586558 TSACCQ96A04 125 aaPredicted RBP18.98■□□□□ 0.63
DDX39A-204ENST00000586558 STAMBPL1Q96FJ0 436 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 FAM129AQ9BZQ8 928 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 SUDS3Q9H7L9 328 aaPredicted RBP18.98■□□□□ 0.63
DDX39A-204ENST00000586558 UGT1A7Q9HAW7 530 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 UGT1A10Q9HAW8 530 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 UGT1A8Q9HAW9 530 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 CYP4F12Q9HCS2 524 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 SPASTQ9UBP0 616 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 KLF15Q9UIH9 416 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 CRLS1Q9UJA2 301 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 MAD1L1Q9Y6D9 718 aa18.98■□□□□ 0.63
DDX39A-204ENST00000586558 OAS3Q9Y6K5 1087 aaKnown RBP18.98■□□□□ 0.63
DDX39A-204ENST00000586558 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.97■□□□□ 0.63
DDX39A-204ENST00000586558 C4orf47A7E2U8 309 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 TNFP01375 233 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 NMBRP28336 390 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 SLC7A5Q01650 507 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 INAVAQ3KP66 663 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 ZNF542PQ5EBM4 170 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 ZRANB3Q5FWF4 1079 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 FNBP1LQ5T0N5 605 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 GPRC6AQ5T6X5 926 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 KIAA0930Q6ICG6 404 aaPredicted RBP18.97■□□□□ 0.63
DDX39A-204ENST00000586558 TMEM135Q86UB9 458 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 CCNJLQ8IV13 435 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 SDR16C5Q8N3Y7 309 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 FSTL5Q8N475 847 aaPredicted RBP18.97■□□□□ 0.63
DDX39A-204ENST00000586558 OR6P1Q8NGX9 317 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 OR4L1Q8NH43 312 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 SAP25Q8TEE9 199 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 ART4Q93070 314 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 PHACTR1Q9C0D0 580 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 PNMA8BQ9ULN7 279 aaPredicted RBP18.97■□□□□ 0.63
DDX39A-204ENST00000586558 TMEM98Q9Y2Y6 226 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 CSNK1G3Q9Y6M4 447 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 MYLKQ15746 1914 aa18.97■□□□□ 0.63
DDX39A-204ENST00000586558 GPR39O43194 453 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 USP1O94782 785 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 TTC4O95801 387 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 POLBP06746 335 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 PGAM1P18669 254 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 DGKAP23743 735 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 FOXN2P32314 431 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 POLD2P49005 469 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 GUCY2DQ02846 1103 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 DHX9Q08211 1270 aaKnown RBP18.96■□□□□ 0.63
DDX39A-204ENST00000586558 ELOCQ15369 112 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 BBS9Q3SYG4 887 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 ANKRD20A4Q4UJ75 823 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 AARS2Q5JTZ9 985 aaKnown RBP18.96■□□□□ 0.63
DDX39A-204ENST00000586558 LYPLAL1Q5VWZ2 237 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 RD3Q7Z3Z2 195 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 ADGRG6Q86SQ4 1221 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 GALNT13Q8IUC8 556 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 RBFAQ8N0V3 343 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 ZNF548Q8NEK5 533 aaPredicted RBP18.96■□□□□ 0.63
DDX39A-204ENST00000586558 MFSD3Q96ES6 412 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 TTC25Q96NG3 672 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 TTC1Q99614 292 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 EBNA1BP2Q99848 306 aaKnown RBP18.96■□□□□ 0.63
DDX39A-204ENST00000586558 LRRC61Q9BV99 259 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 FOXP3Q9BZS1 431 aa18.96■□□□□ 0.63
DDX39A-204ENST00000586558 OR2AG1Q9H205 316 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms