RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 HOXD12P35452 270 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 RABIFP47224 123 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 TTPAP49638 278 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 KIAA1024LP59773 190 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 OVGP1Q12889 678 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 SEMA3AQ14563 771 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 LDLRAP1Q5SW96 308 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 ZNF470Q6ECI4 717 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 KIAA0408Q6ZU52 694 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 CILP2Q8IUL8 1156 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 RGL4Q8IZJ4 473 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 MFSD2AQ8NA29 543 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 HNRNPLLQ8WVV9 542 aaKnown RBP16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 FUBP1Q96AE4 644 aaKnown RBP16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 HIC2Q96JB3 615 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 TCF12Q99081 682 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 APOOQ9BUR5 198 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 TM9SF3Q9HD45 589 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 PHPT1Q9NRX4 125 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 CA5BQ9Y2D0 317 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 OR1A2Q9Y585 309 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 R4GN57 208 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 CACNA1HO95180 2353 aa16.82■□□□□ 0.28
PRKCSH-203ENST00000586486 IGLV3-16A0A075B6K0 115 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 A0A1W2PR77 199 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 FAM159BA6NKW6 160 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 PRSS56P0CW18 603 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 MAOBP27338 520 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 PPARGP37231 505 aaPredicted RBP16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 CDKN1CP49918 316 aaPredicted RBP16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 ITIH4Q14624 930 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 GPRC6AQ5T6X5 926 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 TEDDM1Q5T9Z0 273 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 KDM7AQ6ZMT4 941 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 GALNT7Q86SF2 657 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 SDCCAG8Q86SQ7 713 aaPredicted RBP16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 SERPINA9Q86WD7 417 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 FBF1Q8TES7 1133 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 CDKL2Q92772 493 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 LOXL4Q96JB6 756 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 TTC1Q99614 292 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 IRF2BPLQ9H1B7 796 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 MIR1-1HGQ9H1L0 117 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 FAM96AQ9H5X1 160 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 ACSS3Q9H6R3 686 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 PPANQ9NQ55 473 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 AASDHPPTQ9NRN7 309 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 ZFATQ9P243 1243 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 SUSD2Q9UGT4 822 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 PILRBQ9UKJ0 227 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 A0A087WUV0 522 aaPredicted RBP16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 CACNB4O00305 520 aaPredicted RBP16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 INPP4BO15327 924 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 BCAT2O15382 392 aaPredicted RBP16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 SLC25A14O95258 325 aaPredicted RBP16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 CD38P28907 300 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 SLC1A2P43004 574 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 NAB1Q13506 487 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 NFATC4Q14934 902 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 SMAD1Q15797 465 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 UAP1Q16222 522 aaPredicted RBP16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 DBN1Q16643 649 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 RNF187Q5TA31 235 aaPredicted RBP16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 PACS1Q6VY07 963 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 PRR23BQ6ZRT6 265 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 TAS2R42Q7RTR8 314 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 OTUD6BQ8N6M0 293 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 C2CD4AQ8NCU7 369 aaPredicted RBP16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 OR13H1Q8NG92 308 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 HEXDCQ8WVB3 486 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 COPS8Q99627 209 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 LGR4Q9BXB1 951 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 SMYD2Q9NRG4 433 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 IARS2Q9NSE4 1012 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 INTS10Q9NVR2 710 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 NSMCE4AQ9NXX6 385 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 ZDHHC3Q9NYG2 299 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 RABGEF1Q9UJ41 708 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 VPS9D1Q9Y2B5 631 aa16.81■□□□□ 0.28
PRKCSH-203ENST00000586486 USP34Q70CQ2 3546 aa16.8■□□□□ 0.28
PRKCSH-203ENST00000586486 A0A1B0GTW7 788 aa16.8■□□□□ 0.28
PRKCSH-203ENST00000586486 PRR5-ARHGAP8B1AHC4 643 aa16.8■□□□□ 0.28
PRKCSH-203ENST00000586486 PFDN6O15212 129 aa16.8■□□□□ 0.28
PRKCSH-203ENST00000586486 GNSP15586 552 aa16.8■□□□□ 0.28
PRKCSH-203ENST00000586486 AFF3P51826 1226 aaKnown RBP16.8■□□□□ 0.28
PRKCSH-203ENST00000586486 KBTBD12Q3ZCT8 623 aa16.8■□□□□ 0.28
PRKCSH-203ENST00000586486 Q6ZSR6 202 aa16.8■□□□□ 0.28
PRKCSH-203ENST00000586486 MARK2Q7KZI7 788 aaKnown RBP16.8■□□□□ 0.28
PRKCSH-203ENST00000586486 SLC26A11Q86WA9 606 aa16.8■□□□□ 0.28
PRKCSH-203ENST00000586486 DCP2Q8IU60 420 aaKnown RBP16.8■□□□□ 0.28
PRKCSH-203ENST00000586486 SYT12Q8IV01 421 aa16.8■□□□□ 0.28
PRKCSH-203ENST00000586486 DENND6AQ8IWF6 608 aa16.8■□□□□ 0.28
PRKCSH-203ENST00000586486 CYTH2Q99418 400 aa16.8■□□□□ 0.28
PRKCSH-203ENST00000586486 ZCCHC2Q9C0B9 1178 aaKnown RBP16.8■□□□□ 0.28
PRKCSH-203ENST00000586486 TRIM39Q9HCM9 518 aa16.8■□□□□ 0.28
PRKCSH-203ENST00000586486 VPS18Q9P253 973 aa16.8■□□□□ 0.28
PRKCSH-203ENST00000586486 FBXO5Q9UKT4 447 aa16.8■□□□□ 0.28
PRKCSH-203ENST00000586486 ATXN2Q99700 1313 aaKnown RBP16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 TP53BP1Q12888 1972 aaPredicted RBP16.79■□□□□ 0.28
PRKCSH-203ENST00000586486 LRP4O75096 1905 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms