RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 EPB41L1Q9H4G0 881 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 UCK1Q9HA47 277 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 PCDH9Q9HC56 1237 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 SIDT1Q9NXL6 827 aaKnown RBP14.31□□□□□ -0.12
SDF2-202ENST00000585428 CPNE7Q9UBL6 633 aa14.31□□□□□ -0.12
SDF2-202ENST00000585428 A0A1B0GTH6 734 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 ANKRD66B4E2M5 251 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 GRID2O43424 1007 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 MFSD11O43934 449 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 C9P02748 559 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 CYP1A2P05177 515 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 MMP2P08253 660 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 ANKRD34CP0C6C1 535 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 ACP5P13686 325 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 SLC2A4P14672 509 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 F8A1P23610 371 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 STAT5AP42229 794 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 UBE2IP63279 158 aaKnown RBP14.3□□□□□ -0.12
SDF2-202ENST00000585428 MC1RQ01726 317 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 TYRO3Q06418 890 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 DPYSL3Q14195 570 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 KRT81Q14533 505 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 IFI16Q16666 785 aaKnown RBP14.3□□□□□ -0.12
SDF2-202ENST00000585428 DEFB109BQ30KR1 87 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 ANKRD20A8PQ5CZ79 823 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 KDELC2Q7Z4H8 507 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 PLXDC1Q8IUK5 500 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.3□□□□□ -0.12
SDF2-202ENST00000585428 RNF25Q96BH1 459 aaPredicted RBP14.3□□□□□ -0.12
SDF2-202ENST00000585428 C9orf72Q96LT7 481 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 PLEKHG4BQ96PX9 1271 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 TBC1D10AQ9BXI6 508 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 CARD9Q9H257 536 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 STN1Q9H668 368 aaKnown RBP14.3□□□□□ -0.12
SDF2-202ENST00000585428 PRDM8Q9NQV8 689 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 OGFRQ9NZT2 677 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 ATXN10Q9UBB4 475 aa14.3□□□□□ -0.12
SDF2-202ENST00000585428 C1orf232A0A0U1RR37 186 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 LILRA5A6NI73 299 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 MYO1FO00160 1098 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 SNX2O60749 519 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 ZNF8P17098 575 aaPredicted RBP14.29□□□□□ -0.12
SDF2-202ENST00000585428 TCN2P20062 427 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 PPM1FP49593 454 aaPredicted RBP14.29□□□□□ -0.12
SDF2-202ENST00000585428 SLC10A2Q12908 348 aaPredicted RBP14.29□□□□□ -0.12
SDF2-202ENST00000585428 QPCTQ16769 361 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 FILIP1LQ4L180 1135 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 FIGNQ5HY92 759 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 CCDC183Q5T5S1 534 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 ESX1Q8N693 406 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 AVL9Q8NBF6 648 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 LPCAT1Q8NF37 534 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 LRRN4Q8WUT4 740 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 STARD8Q92502 1023 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 MLPHQ9BV36 600 aaPredicted RBP14.29□□□□□ -0.12
SDF2-202ENST00000585428 NUP85Q9BW27 656 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 NAT10Q9H0A0 1025 aaKnown RBP14.29□□□□□ -0.12
SDF2-202ENST00000585428 TRIM39Q9HCM9 518 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 SCHIP1Q9P0W5 487 aaPredicted RBP14.29□□□□□ -0.12
SDF2-202ENST00000585428 KLHL3Q9UH77 587 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 ANAPC7Q9UJX3 599 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 KCNMB2Q9Y691 235 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 BZW2Q9Y6E2 419 aaKnown RBP14.29□□□□□ -0.12
SDF2-202ENST00000585428 RPS6KL1Q9Y6S9 549 aa14.29□□□□□ -0.12
SDF2-202ENST00000585428 MN1Q10571 1320 aaPredicted RBP14.29□□□□□ -0.12
SDF2-202ENST00000585428 PRR19A6NJB7 356 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 SMTNL1A8MU46 457 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 CHUKO15111 745 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 TOX3O15405 576 aaPredicted RBP14.28□□□□□ -0.12
SDF2-202ENST00000585428 HLA-DQB2P05538 268 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 ZNF28P17035 718 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 CA4P22748 312 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 SLC19A1P41440 591 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 HADHQ16836 314 aaKnown RBP14.28□□□□□ -0.12
SDF2-202ENST00000585428 ATP1A1-AS1Q5TC04 95 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 PQLC3Q8N755 202 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 CNTD1Q8N815 330 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 KCTD6Q8NC69 237 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 CCHCR1Q8TD31 782 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 SYN2Q92777 582 aaPredicted RBP14.28□□□□□ -0.12
SDF2-202ENST00000585428 FAF2Q96CS3 445 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 ZMYND15Q9H091 742 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 KLC4Q9NSK0 619 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 HAUS2Q9NVX0 235 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 DTLQ9NZJ0 730 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 PKD2L2Q9NZM6 624 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 ZNF624Q9P2J8 865 aaPredicted RBP14.28□□□□□ -0.12
SDF2-202ENST00000585428 SLC23A2Q9UGH3 650 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 MRPS18BQ9Y676 258 aaKnown RBP14.28□□□□□ -0.12
SDF2-202ENST00000585428 SLC30A1Q9Y6M5 507 aa14.28□□□□□ -0.12
SDF2-202ENST00000585428 NAV2Q8IVL1 2488 aa14.27□□□□□ -0.12
SDF2-202ENST00000585428 FLNCQ14315 2725 aa14.27□□□□□ -0.12
SDF2-202ENST00000585428 A0A087X0T9 212 aa14.27□□□□□ -0.13
SDF2-202ENST00000585428 GPR89AB7ZAQ6 455 aa14.27□□□□□ -0.13
SDF2-202ENST00000585428 K7EM74 188 aa14.27□□□□□ -0.13
SDF2-202ENST00000585428 UBXN7O94888 489 aa14.27□□□□□ -0.13
SDF2-202ENST00000585428 RECKO95980 971 aa14.27□□□□□ -0.13
SDF2-202ENST00000585428 FAM228BP0C875 321 aa14.27□□□□□ -0.13
SDF2-202ENST00000585428 GPR89BP0CG08 455 aa14.27□□□□□ -0.13
SDF2-202ENST00000585428 GP1BBP13224 206 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms