RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 AGAP2Q99490 1192 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 GRHL1Q9NZI5 618 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 OR14I1A6ND48 311 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 FECHP22830 423 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 RPL9P32969 192 aaKnown RBP12.98□□□□□ -0.33
RNF43-208ENST00000584437 MANFP55145 182 aaKnown RBP12.98□□□□□ -0.33
RNF43-208ENST00000584437 CNTN2Q02246 1040 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 HERC3Q15034 1050 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 RALGPS1Q5JS13 557 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 APOBEC3HQ6NTF7 200 aaKnown RBP12.98□□□□□ -0.33
RNF43-208ENST00000584437 DCLRE1AQ6PJP8 1040 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 ANKS1BQ7Z6G8 1248 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 GATA5Q9BWX5 397 aaPredicted RBP12.98□□□□□ -0.33
RNF43-208ENST00000584437 KCNN2Q9H2S1 579 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 EBF2Q9HAK2 575 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 NPEPPSL1A6NEC2 478 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 YDJCA8MPS7 323 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 ACSL4O60488 711 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 IFNW1P05000 195 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 IFNA6P05013 189 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 VEGFAP15692 232 aaPredicted RBP12.98□□□□□ -0.33
RNF43-208ENST00000584437 SLC7A1P30825 629 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 ADRA1BP35368 520 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 ARFIP1P53367 373 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 MAXP61244 160 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 CYP1B1Q16678 543 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 FNDC3BQ53EP0 1204 aaKnown RBP12.98□□□□□ -0.33
RNF43-208ENST00000584437 GCNT6Q5T4J0 391 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 PPP1R26Q5T8A7 1209 aaPredicted RBP12.98□□□□□ -0.33
RNF43-208ENST00000584437 KIAA0319LQ8IZA0 1049 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 C11orf65Q8NCR3 313 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 ZNF248Q8NDW4 579 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 SLC16A10Q8TF71 515 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 KBTBD7Q8WVZ9 684 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 RHBGQ9H310 441 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 MRPL42Q9Y6G3 142 aaKnown RBP12.98□□□□□ -0.33
RNF43-208ENST00000584437 NRCAMQ92823 1304 aa12.98□□□□□ -0.33
RNF43-208ENST00000584437 LRCH4O75427 683 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 ARF5P84085 180 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 NRG1Q02297 640 aaPredicted RBP12.97□□□□□ -0.33
RNF43-208ENST00000584437 DLG1Q12959 904 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 ZNF697Q5TEC3 545 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 RD3Q7Z3Z2 195 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 FAM98AQ8NCA5 519 aaKnown RBP12.97□□□□□ -0.33
RNF43-208ENST00000584437 HJURPQ8NCD3 748 aaPredicted RBP12.97□□□□□ -0.33
RNF43-208ENST00000584437 TIFAQ96CG3 184 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 GBA3Q9H227 469 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 FAM124BQ9H5Z6 455 aaPredicted RBP12.97□□□□□ -0.33
RNF43-208ENST00000584437 SEC14L3Q9UDX4 400 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 OR10H1Q9Y4A9 318 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 AQP12BA6NM10 295 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 GRM5P41594 1212 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 GRM3Q14832 879 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 CARTPTQ16568 116 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 ZDHHC20Q5W0Z9 365 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 CHSY3Q70JA7 882 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 UBE2R2Q712K3 238 aaPredicted RBP12.97□□□□□ -0.33
RNF43-208ENST00000584437 AQP12AQ8IXF9 295 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 ZNF781Q8N8C0 355 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 TTC29Q8NA56 475 aaPredicted RBP12.97□□□□□ -0.33
RNF43-208ENST00000584437 DNAJB8Q8NHS0 232 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 CXorf40AQ8TE69 158 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 RFKQ969G6 155 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 TOP1MTQ969P6 601 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 NUSAP1Q9BXS6 441 aaKnown RBP12.97□□□□□ -0.33
RNF43-208ENST00000584437 STARD7Q9NQZ5 370 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 ADARB2Q9NS39 739 aaKnown RBP12.97□□□□□ -0.33
RNF43-208ENST00000584437 KCTD5Q9NXV2 234 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 NDOR1Q9UHB4 597 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 ZNF780BQ9Y6R6 833 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 FPGTO14772 594 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 ERAL1O75616 437 aaKnown RBP12.97□□□□□ -0.33
RNF43-208ENST00000584437 ASLP04424 464 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 PIRTP0C851 137 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 CLK3P49761 638 aaKnown RBP12.97□□□□□ -0.33
RNF43-208ENST00000584437 RGS1Q08116 209 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 MYBPC3Q14896 1274 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 PPM1JQ5JR12 505 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 IL23RQ5VWK5 629 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 FAM171BQ6P995 826 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 INTS10Q9NVR2 710 aaKnown RBP12.97□□□□□ -0.33
RNF43-208ENST00000584437 ADAMTS13Q76LX8 1427 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 RAP2AP10114 183 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 CXCR3P49682 368 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 ATN1P54259 1190 aaPredicted RBP12.97□□□□□ -0.33
RNF43-208ENST00000584437 ZBED5Q49AG3 693 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 RBM48Q5RL73 367 aaKnown RBP12.97□□□□□ -0.33
RNF43-208ENST00000584437 LRRN4Q8WUT4 740 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 FCRL2Q96LA5 508 aaPredicted RBP12.97□□□□□ -0.33
RNF43-208ENST00000584437 APOLD1Q96LR9 279 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 ZFYVE1Q9HBF4 777 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 DNAJC11Q9NVH1 559 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 DNAJB9Q9UBS3 223 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 HMGXB4Q9UGU5 601 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 SALL4Q9UJQ4 1053 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 NCKAP1Q9Y2A7 1128 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 ADGRB2O60241 1585 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 GRIN2DO15399 1336 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 PCP4L1A6NKN8 68 aa12.97□□□□□ -0.33
RNF43-208ENST00000584437 ZW10O43264 779 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms