RNA–Protein interactions for RNA: ENST00000584099.1

ERBB2-217, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 4

Gene ERBB2, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-217	ENST00000584099	PTCD2	Q8WV60	388 aa	Known RBP	12.84	□□□□□ -0.35
ERBB2-217	ENST00000584099	SGF29	Q96ES7	293 aa		12.84	□□□□□ -0.35
ERBB2-217	ENST00000584099	MED8	Q96G25	268 aa		12.84	□□□□□ -0.35
ERBB2-217	ENST00000584099	PLEKHG4B	Q96PX9	1271 aa		12.84	□□□□□ -0.35
ERBB2-217	ENST00000584099	SLC38A3	Q99624	504 aa		12.84	□□□□□ -0.35
ERBB2-217	ENST00000584099	ZPBP	Q9BS86	351 aa		12.84	□□□□□ -0.35
ERBB2-217	ENST00000584099	RDH14	Q9HBH5	336 aa		12.84	□□□□□ -0.35
ERBB2-217	ENST00000584099	ZNHIT2	Q9UHR6	403 aa		12.84	□□□□□ -0.35
ERBB2-217	ENST00000584099	ADGRG1	Q9Y653	693 aa		12.84	□□□□□ -0.35
ERBB2-217	ENST00000584099	FLNB	O75369	2602 aa	Known RBP	12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	LRRK1	Q38SD2	2015 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099		A0A0A6YYK5	440 aa	Predicted RBP	12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	PRAMEF33	A0A0G2JMD5	474 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	FADS2P1	A8MWK0	482 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	C9orf172	C9J069	976 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	CHUK	O15111	745 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	INPP4B	O15327	924 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	CAPN5	O15484	640 aa	Predicted RBP	12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	GRID2	O43424	1007 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	PRAMEF10	O60809	474 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	PPFIA2	O75334	1257 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	KRT1	P04264	644 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	HGF	P14210	728 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	HMGCL	P35914	325 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	CDKN2B	P42772	138 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	HHEX	Q03014	270 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	WASH2P	Q6VEQ5	465 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	USP53	Q70EK8	1073 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	ZNF605	Q86T29	641 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	RBM12B	Q8IXT5	1001 aa	Known RBP	12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	KATNAL2	Q8IYT4	538 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	TFB1M	Q8WVM0	346 aa	Known RBP	12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	USP7	Q93009	1102 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	GLYATL1	Q969I3	302 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	CCDC74B	Q96LY2	380 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	VPS35	Q96QK1	796 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	SMIM14	Q96QK8	99 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	NUDT22	Q9BRQ3	303 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	GLOD4	Q9HC38	313 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	WASH6P	Q9NQA3	447 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	SPTLC3	Q9NUV7	552 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	HACD3	Q9P035	362 aa		12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
ERBB2-217	ENST00000584099	COL6A6	A6NMZ7	2263 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	LOC285095	A0A1B0GVY8	99 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	LILRA5	A6NI73	299 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	HACD1	B0YJ81	288 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	TOX3	O15405	576 aa	Predicted RBP	12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	EFS	O43281	561 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	SPOP	O43791	374 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	ZRANB2	O95218	330 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	SLC25A14	O95258	325 aa	Predicted RBP	12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	ANKRD34C	P0C6C1	535 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	XRCC1	P18887	633 aa	Predicted RBP	12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	ITIH1	P19827	911 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	TNNT3	P45378	269 aa	Predicted RBP	12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	ATP1A2	P50993	1020 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	MANEA	Q5SRI9	462 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	MARK2	Q7KZI7	788 aa	Known RBP	12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	CHST15	Q7LFX5	561 aa	Predicted RBP	12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	ARHGAP22	Q7Z5H3	698 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	TRIM74	Q86UV6	250 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	RFX6	Q8HWS3	928 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	RCOR2	Q8IZ40	523 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	BRSK1	Q8TDC3	778 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	PATE1	Q8WXA2	126 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	EID2B	Q96D98	161 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	AHCYL2	Q96HN2	611 aa	Known RBP	12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	RBM41	Q96IZ5	413 aa	Known RBP	12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	AGAP3	Q96P47	875 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	C19orf43	Q9BQ61	176 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	TIMM29	Q9BSF4	260 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	SUDS3	Q9H7L9	328 aa	Predicted RBP	12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	TBC1D29	Q9UFV1	150 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	FAM153A	Q9UHL3	310 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	TRHDE	Q9UKU6	1024 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	EFR3B	Q9Y2G0	817 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	ZNF711	Q9Y462	761 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	OAS3	Q9Y6K5	1087 aa	Known RBP	12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099	PIEZO2	Q9H5I5	2752 aa		12.82	□□□□□ -0.36
ERBB2-217	ENST00000584099		A0A0U1RQS6	177 aa		12.81	□□□□□ -0.36
ERBB2-217	ENST00000584099	KLHL33	A6NCF5	533 aa		12.81	□□□□□ -0.36
ERBB2-217	ENST00000584099	PRR19	A6NJB7	356 aa		12.81	□□□□□ -0.36
ERBB2-217	ENST00000584099	ATP1A1	P05023	1023 aa	Known RBP	12.81	□□□□□ -0.36
ERBB2-217	ENST00000584099	FGF3	P11487	239 aa	Predicted RBP	12.81	□□□□□ -0.36
ERBB2-217	ENST00000584099	CCL4	P13236	92 aa		12.81	□□□□□ -0.36
ERBB2-217	ENST00000584099	COMT	P21964	271 aa		12.81	□□□□□ -0.36
ERBB2-217	ENST00000584099	PTPN3	P26045	913 aa		12.81	□□□□□ -0.36
ERBB2-217	ENST00000584099	ETV5	P41161	510 aa		12.81	□□□□□ -0.36
ERBB2-217	ENST00000584099	MAGEA1	P43355	309 aa		12.81	□□□□□ -0.36
ERBB2-217	ENST00000584099	MAPK10	P53779	464 aa		12.81	□□□□□ -0.36
ERBB2-217	ENST00000584099	COPS2	P61201	443 aa		12.81	□□□□□ -0.36
ERBB2-217	ENST00000584099	XRCC4	Q13426	336 aa		12.81	□□□□□ -0.36
ERBB2-217	ENST00000584099	GALNT3	Q14435	633 aa		12.81	□□□□□ -0.36
ERBB2-217	ENST00000584099	PPP2R5E	Q16537	467 aa		12.81	□□□□□ -0.36
ERBB2-217	ENST00000584099	TFDP3	Q5H9I0	405 aa		12.81	□□□□□ -0.36
ERBB2-217	ENST00000584099	DCAF12	Q5T6F0	453 aa		12.81	□□□□□ -0.36
ERBB2-217	ENST00000584099	AGAP9	Q5VTM2	703 aa		12.81	□□□□□ -0.36
ERBB2-217	ENST00000584099	C11orf63	Q6NUN7	778 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 72 ms