RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 LRRC14Q15048 493 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SETMARQ53H47 684 aaPredicted RBP16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 LYPLAL1Q5VWZ2 237 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ZNF470Q6ECI4 717 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PNCKQ6P2M8 343 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CERS6Q6ZMG9 384 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 KIAA0408Q6ZU52 694 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 TAS2R42Q7RTR8 314 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 GALNT7Q86SF2 657 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 LDB1Q86U70 411 aaPredicted RBP16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PELI3Q8N2H9 469 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PNPLA1Q8N8W4 532 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SLC44A1Q8WWI5 657 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 TCF12Q99081 682 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 KLF6Q99612 283 aaPredicted RBP16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CPNE1Q99829 537 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 C1QTNF7Q9BXJ2 289 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 VIPAS39Q9H9C1 493 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PARD6AQ9NPB6 346 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 MBNL1Q9NR56 388 aaKnown RBP16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SLC17A6Q9P2U8 582 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SLC24A2Q9UI40 661 aa16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CNOT6Q9ULM6 557 aaKnown RBP16.23■□□□□ 0.19
CDK5RAP3-228ENST00000583363 METTL12A8MUP2 240 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 FADS2P1A8MWK0 482 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 K7ESM1 405 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 RAD51BO15315 384 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SLC31A1O15431 190 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 GPR39O43194 453 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 NDUFS2O75306 463 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SOD1P00441 154 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 IGHV4-34P06331 123 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PYGLP06737 847 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SDHBP21912 280 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 TEAD1P28347 426 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PMLP29590 882 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 GPR1P46091 355 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 LEPRP48357 1165 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 MPP1Q00013 466 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 IFFO1Q0D2I5 559 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 TYSND1Q2T9J0 566 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 AARS2Q5JTZ9 985 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 GRTP1Q5TC63 336 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ADGRD1Q6QNK2 874 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SLC36A4Q6YBV0 504 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 STRA8Q7Z7C7 330 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 LONP2Q86WA8 852 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SERPINA9Q86WD7 417 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 TDRPQ86YL5 185 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 OTUD6BQ8N6M0 293 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PLA2G15Q8NCC3 412 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CADM4Q8NFZ8 388 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 BTN2A2Q8WVV5 523 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ULK4Q96C45 1275 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 MRRFQ96E11 262 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SPACA7Q96KW9 195 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 VPS35Q96QK1 796 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 MCMBPQ9BTE3 642 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 FAM126AQ9BYI3 521 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PCED1AQ9H1Q7 454 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PPCSQ9HAB8 311 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 EBF2Q9HAK2 575 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SMOXQ9NWM0 555 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CRLS1Q9UJA2 301 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PSAT1Q9Y617 370 aa16.22■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PRR5-ARHGAP8B1AHC4 643 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 RASGRF2O14827 1237 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 FAM155BO75949 473 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 SASH3O75995 380 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 HAUS5O94927 633 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 FSBPO95073 299 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 F7P08709 466 aaPredicted RBP16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ACRV1P26436 265 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 TRIM23P36406 574 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 NUDT1P36639 197 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PPARGP37231 505 aaPredicted RBP16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 GP5P40197 560 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 TTPAP49638 278 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ARHGAP8P85298 464 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ZNF844Q08AG5 666 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 IRF4Q15306 451 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 DBN1Q16643 649 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ZNF789Q5FWF6 425 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 RAET1GQ6H3X3 334 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ADAMTSL4Q6UY14 1074 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PACS1Q6VY07 963 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 NXPE1Q8N323 547 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 DENND6BQ8NEG7 585 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 DCAKDQ8WVC6 231 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 BIRC7Q96CA5 298 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PAFAH2Q99487 392 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 TTC1Q99614 292 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 FBXO6Q9NRD1 293 aaPredicted RBP16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 ZDHHC3Q9NYG2 299 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 CDV3Q9UKY7 258 aaKnown RBP16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 HS3ST3A1Q9Y663 406 aa16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 KMT2BQ9UMN6 2715 aaPredicted RBP16.21■□□□□ 0.19
CDK5RAP3-228ENST00000583363 PLXNA2O75051 1894 aa16.2■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ZNF106Q9H2Y7 1883 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms