RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 TREX1Q9NSU2 369 aa21.44■■□□□ 1.02
TSEN54-208ENST00000583173 VPS18Q9P253 973 aa21.44■■□□□ 1.02
TSEN54-208ENST00000583173 ATXN10Q9UBB4 475 aa21.44■■□□□ 1.02
TSEN54-208ENST00000583173 BTBD3Q9Y2F9 522 aa21.44■■□□□ 1.02
TSEN54-208ENST00000583173 ST14Q9Y5Y6 855 aa21.44■■□□□ 1.02
TSEN54-208ENST00000583173 PCNX2A6NKB5 2137 aa21.44■■□□□ 1.02
TSEN54-208ENST00000583173 TRBV5-4A0A0C4DH59 114 aa21.43■■□□□ 1.02
TSEN54-208ENST00000583173 SCAMP1O15126 338 aa21.43■■□□□ 1.02
TSEN54-208ENST00000583173 GPR39O43194 453 aa21.43■■□□□ 1.02
TSEN54-208ENST00000583173 CRADDP78560 199 aa21.43■■□□□ 1.02
TSEN54-208ENST00000583173 CBLBQ13191 982 aa21.43■■□□□ 1.02
TSEN54-208ENST00000583173 SEPT6Q14141 434 aa21.43■■□□□ 1.02
TSEN54-208ENST00000583173 PYCR3Q53H96 274 aa21.43■■□□□ 1.02
TSEN54-208ENST00000583173 ZNF648Q5T619 568 aaPredicted RBP21.43■■□□□ 1.02
TSEN54-208ENST00000583173 IZUMO3Q5VZ72 239 aa21.43■■□□□ 1.02
TSEN54-208ENST00000583173 HIBCHQ6NVY1 386 aaPredicted RBP21.43■■□□□ 1.02
TSEN54-208ENST00000583173 MPP5Q8N3R9 675 aa21.43■■□□□ 1.02
TSEN54-208ENST00000583173 SGSM3Q96HU1 749 aa21.43■■□□□ 1.02
TSEN54-208ENST00000583173 ERP44Q9BS26 406 aa21.43■■□□□ 1.02
TSEN54-208ENST00000583173 SLC13A1Q9BZW2 595 aa21.43■■□□□ 1.02
TSEN54-208ENST00000583173 CYP4F12Q9HCS2 524 aa21.43■■□□□ 1.02
TSEN54-208ENST00000583173 XAB2Q9HCS7 855 aaKnown RBP21.43■■□□□ 1.02
TSEN54-208ENST00000583173 ARFGAP3Q9NP61 516 aa21.43■■□□□ 1.02
TSEN54-208ENST00000583173 SYBUQ9NX95 663 aa21.43■■□□□ 1.02
TSEN54-208ENST00000583173 SPASTQ9UBP0 616 aa21.43■■□□□ 1.02
TSEN54-208ENST00000583173 APOBEC3BQ9UH17 382 aaKnown RBP21.43■■□□□ 1.02
TSEN54-208ENST00000583173 CDV3Q9UKY7 258 aaKnown RBP21.43■■□□□ 1.02
TSEN54-208ENST00000583173 PCOLCE2Q9UKZ9 415 aa21.43■■□□□ 1.02
TSEN54-208ENST00000583173 SUFUQ9UMX1 484 aa21.43■■□□□ 1.02
TSEN54-208ENST00000583173 TP53BP1Q12888 1972 aaPredicted RBP21.43■■□□□ 1.02
TSEN54-208ENST00000583173 H3BM21 787 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 CHUKO15111 745 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 FLRT2O43155 660 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 AQP9O43315 295 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 NUAK1O60285 661 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 PRAMEF1O95521 474 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 CELA2BP08218 269 aaPredicted RBP21.42■■□□□ 1.02
TSEN54-208ENST00000583173 CSRP1P21291 193 aaKnown RBP21.42■■□□□ 1.02
TSEN54-208ENST00000583173 RPL21P46778 160 aaKnown RBP21.42■■□□□ 1.02
TSEN54-208ENST00000583173 NFATC2Q13469 925 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 C1orf61Q13536 156 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 ITGA9Q13797 1035 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 MORF4L2Q15014 288 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 PRRT3Q5FWE3 981 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 DUPD1Q68J44 220 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 RD3Q7Z3Z2 195 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 NRROSQ86YC3 692 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 SDR16C5Q8N3Y7 309 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 DDHD1Q8NEL9 900 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 CAMK1GQ96NX5 476 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 TMEM168Q9H0V1 697 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 ASB8Q9H765 288 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 RMI1Q9H9A7 625 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 TRNAU1APQ9NX07 287 aaKnown RBP21.42■■□□□ 1.02
TSEN54-208ENST00000583173 SOX13Q9UN79 622 aa21.42■■□□□ 1.02
TSEN54-208ENST00000583173 TDRD6O60522 2096 aaKnown RBP21.41■■□□□ 1.02
TSEN54-208ENST00000583173 CCDC78A2IDD5 438 aa21.41■■□□□ 1.02
TSEN54-208ENST00000583173 CCDC162PA2VCL2 907 aa21.41■■□□□ 1.02
TSEN54-208ENST00000583173 SDR42E2A6NKP2 422 aa21.41■■□□□ 1.02
TSEN54-208ENST00000583173 BHMG1C9JSJ3 638 aaPredicted RBP21.41■■□□□ 1.02
TSEN54-208ENST00000583173 LMO7DNF2Z398 122 aa21.41■■□□□ 1.02
TSEN54-208ENST00000583173 GOLGA8MH3BSY2 632 aa21.41■■□□□ 1.02
TSEN54-208ENST00000583173 TRIM38O00635 465 aa21.41■■□□□ 1.02
TSEN54-208ENST00000583173 SEC31AO94979 1220 aaKnown RBP21.41■■□□□ 1.02
TSEN54-208ENST00000583173 ZNF8P17098 575 aaPredicted RBP21.41■■□□□ 1.02
TSEN54-208ENST00000583173 MC4RP32245 332 aa21.41■■□□□ 1.02
TSEN54-208ENST00000583173 CDKN1CP49918 316 aaPredicted RBP21.41■■□□□ 1.02
TSEN54-208ENST00000583173 TMEM115Q12893 351 aaPredicted RBP21.41■■□□□ 1.02
TSEN54-208ENST00000583173 GPR33Q49SQ1 333 aa21.41■■□□□ 1.02
TSEN54-208ENST00000583173 GPRC6AQ5T6X5 926 aa21.41■■□□□ 1.02
TSEN54-208ENST00000583173 SNX20Q7Z614 316 aa21.41■■□□□ 1.02
TSEN54-208ENST00000583173 NAXDQ8IW45 347 aa21.41■■□□□ 1.02
TSEN54-208ENST00000583173 PIANPQ8IYJ0 282 aa21.41■■□□□ 1.02
TSEN54-208ENST00000583173 FSTL5Q8N475 847 aaPredicted RBP21.41■■□□□ 1.02
TSEN54-208ENST00000583173 MMGT1Q8N4V1 131 aa21.41■■□□□ 1.02
TSEN54-208ENST00000583173 PPHLN1Q8NEY8 458 aaKnown RBP21.41■■□□□ 1.02
TSEN54-208ENST00000583173 GPBAR1Q8TDU6 330 aa21.41■■□□□ 1.02
TSEN54-208ENST00000583173 HDAC10Q969S8 669 aa21.41■■□□□ 1.02
TSEN54-208ENST00000583173 CARS2Q9HA77 564 aaKnown RBP21.41■■□□□ 1.02
TSEN54-208ENST00000583173 SNX24Q9Y343 169 aa21.41■■□□□ 1.02
TSEN54-208ENST00000583173 MYLKQ15746 1914 aa21.41■■□□□ 1.02
TSEN54-208ENST00000583173 MAGEB16A2A368 324 aa21.4■■□□□ 1.02
TSEN54-208ENST00000583173 EFCAB8A8MWE9 144 aa21.4■■□□□ 1.02
TSEN54-208ENST00000583173 GPR89AB7ZAQ6 455 aa21.4■■□□□ 1.02
TSEN54-208ENST00000583173 SMAPO00193 183 aa21.4■■□□□ 1.02
TSEN54-208ENST00000583173 TPP1O14773 563 aa21.4■■□□□ 1.02
TSEN54-208ENST00000583173 YY2O15391 372 aa21.4■■□□□ 1.02
TSEN54-208ENST00000583173 VEGFDO43915 354 aa21.4■■□□□ 1.02
TSEN54-208ENST00000583173 ZNF500O60304 480 aaPredicted RBP21.4■■□□□ 1.02
TSEN54-208ENST00000583173 GPR89BP0CG08 455 aa21.4■■□□□ 1.02
TSEN54-208ENST00000583173 NMBRP28336 390 aa21.4■■□□□ 1.02
TSEN54-208ENST00000583173 FOXN2P32314 431 aa21.4■■□□□ 1.02
TSEN54-208ENST00000583173 GRK6P43250 576 aa21.4■■□□□ 1.02
TSEN54-208ENST00000583173 ITGA8P53708 1063 aa21.4■■□□□ 1.02
TSEN54-208ENST00000583173 LDLRAP1Q5SW96 308 aa21.4■■□□□ 1.02
TSEN54-208ENST00000583173 FNBP1LQ5T0N5 605 aa21.4■■□□□ 1.02
TSEN54-208ENST00000583173 DOK6Q6PKX4 331 aa21.4■■□□□ 1.02
TSEN54-208ENST00000583173 TMEM135Q86UB9 458 aa21.4■■□□□ 1.02
TSEN54-208ENST00000583173 PHYKPLQ8IUZ5 450 aa21.4■■□□□ 1.02
TSEN54-208ENST00000583173 CCL4L1Q8NHW4 92 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms