RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	EID2B	Q96D98	161 aa		11.51	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	HDAC11	Q96DB2	347 aa		11.51	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	ZNF830	Q96NB3	372 aa	Predicted RBP	11.51	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	DPYSL5	Q9BPU6	564 aa		11.51	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	DDA1	Q9BW61	102 aa		11.51	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	SPATA16	Q9BXB7	569 aa		11.51	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	B3GNT4	Q9C0J1	378 aa		11.51	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	OR2AG1	Q9H205	316 aa		11.51	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	STN1	Q9H668	368 aa	Known RBP	11.51	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	APMAP	Q9HDC9	416 aa		11.51	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	VPS18	Q9P253	973 aa		11.51	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	ATXN10	Q9UBB4	475 aa		11.51	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	NENF	Q9UMX5	172 aa		11.51	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	LRRD1	A4D1F6	860 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	CYSRT1	A8MQ03	144 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114		B4E171	279 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	ANKRD66	B4E2M5	251 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	GOLGA6L19	H0YKK7	550 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	MTX2	O75431	263 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	KRT7	P08729	469 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	H2AFZ	P0C0S5	128 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	KDELR1	P24390	212 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	TSPAN7	P41732	249 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	RPL26	P61254	145 aa	Known RBP	11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	SEPT7	Q16181	437 aa	Known RBP	11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	BORA	Q6PGQ7	559 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	ATG14	Q6ZNE5	492 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	H2AFV	Q71UI9	128 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	SLC9B2	Q86UD5	537 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	PLD5	Q8N7P1	536 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	FATE1	Q969F0	183 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	RTP4	Q96DX8	246 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	AGAP3	Q96P47	875 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	RNF157	Q96PX1	679 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	LYSMD1	Q96S90	227 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	HERPUD2	Q9BSE4	406 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	ADGRE3	Q9BY15	652 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	ASPSCR1	Q9BZE9	553 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	SARS2	Q9NP81	518 aa	Known RBP	11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	KLC4	Q9NSK0	619 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	UVRAG	Q9P2Y5	699 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	AMACR	Q9UHK6	382 aa		11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	RPL26L1	Q9UNX3	145 aa	Known RBP	11.5	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	MYO18B	Q8IUG5	2567 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	LOC101059948	A0A1B0GTJ6	334 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114		A6NCN8	305 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	NKX2-8	O15522	239 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	SUV39H1	O43463	412 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	NUAK1	O60285	661 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	PPFIA2	O75334	1257 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	SLC25A14	O95258	325 aa	Predicted RBP	11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	F3	P13726	295 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	TNNT1	P13805	278 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	TYRP1	P17643	537 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	GFER	P55789	205 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	RAB15	P59190	212 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	DYNLT1	P63172	113 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	PPID	Q08752	370 aa	Known RBP	11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	SLC18A3	Q16572	532 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	ZNF569	Q5MCW4	686 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	WDR74	Q6RFH5	385 aa	Predicted RBP	11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	XKR5	Q6UX68	686 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	TIPARP	Q7Z3E1	657 aa	Known RBP	11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	ARHGAP22	Q7Z5H3	698 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	PHYKPL	Q8IUZ5	450 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	GPR26	Q8NDV2	337 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	SPATA22	Q8NHS9	363 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	SLC25A18	Q9H1K4	315 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	CARD9	Q9H257	536 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	DEF6	Q9H4E7	631 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	ZFYVE1	Q9HBF4	777 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	SCHIP1	Q9P0W5	487 aa	Predicted RBP	11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	PDP2	Q9P2J9	529 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	CPNE7	Q9UBL6	633 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	SLC23A2	Q9UGH3	650 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	IL17B	Q9UHF5	180 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	PILRA	Q9UKJ1	303 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	DNAJC16	Q9Y2G8	782 aa		11.49	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	KIR2DS5	A0A0G2JLQ3	304 aa		11.48	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114		A0A0G2JNG1	304 aa		11.48	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	C3orf70	A6NLC5	250 aa	Predicted RBP	11.48	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	ZNF891	A8MT65	544 aa	Predicted RBP	11.48	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114		F5H423	210 aa	Predicted RBP	11.48	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	KIR2DS3	K7RE56	304 aa		11.48	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	TERT	O14746	1132 aa	Known RBP	11.48	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	APOL1	O14791	398 aa		11.48	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	ARHGAP6	O43182	974 aa		11.48	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	STK17B	O94768	372 aa		11.48	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	MT-CYB	P00156	380 aa	Predicted RBP	11.48	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	KRT1	P04264	644 aa		11.48	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	SFTPC	P11686	197 aa		11.48	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	CSRP3	P50461	194 aa		11.48	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	POLE2	P56282	527 aa		11.48	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	IFI35	P80217	286 aa	Predicted RBP	11.48	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	MC2R	Q01718	297 aa		11.48	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	KCNAB2	Q13303	367 aa		11.48	□□□□□ -0.57
CDK5RAP3-223	ENST00000582114	KIR2DS5	Q14953	304 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms