RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	GPR26	Q8NDV2	337 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ACRBP	Q8NEB7	543 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ACTL9	Q8TC94	416 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	BRSK1	Q8TDC3	778 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	GLYATL1	Q969I3	302 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SH3KBP1	Q96B97	665 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	LRRC45	Q96CN5	670 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SPATA16	Q9BXB7	569 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	TSGA10	Q9BZW7	698 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	GBA3	Q9H227	469 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	STN1	Q9H668	368 aa	Known RBP	12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	AKAP7	Q9P0M2	348 aa	Predicted RBP	12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	RSPH14	Q9UHP6	348 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ZNHIT2	Q9UHR6	403 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	FEZ2	Q9UHY8	353 aa	Predicted RBP	12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ACSL6	Q9UKU0	697 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SHOC2	Q9UQ13	582 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ST14	Q9Y5Y6	855 aa		12.47	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	KIR2DS5	A0A0G2JLQ3	304 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708		A0A0G2JNG1	304 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CDRT15L2	A8MXV6	281 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	KIR2DS3	K7RE56	304 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CHUK	O15111	745 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	GRID2	O43424	1007 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	KCNJ13	O60928	360 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	RBP3	P10745	1247 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	BPI	P17213	487 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	RBL1	P28749	1068 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	EIF3E	P60228	445 aa	Known RBP	12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	PDE1B	Q01064	536 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	TRA2A	Q13595	282 aa	Known RBP eCLIP	12.46	□□□□□ -0.41	1e-7	■□□□□ 8.1
CDK5RAP3-222	ENST00000581708	PRPSAP1	Q14558	356 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	KIR2DS5	Q14953	304 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	LLGL1	Q15334	1064 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	COL28A1	Q2UY09	1125 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SIRPB2	Q5JXA9	342 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	BROX	Q5VW32	411 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	RAB11FIP2	Q7L804	512 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	TRIM74	Q86UV6	250 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	PTCD2	Q8WV60	388 aa	Known RBP	12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	HNRNPLL	Q8WVV9	542 aa	Known RBP	12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ALG3	Q92685	438 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	PRR11	Q96HE9	360 aa	Predicted RBP	12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	OXNAD1	Q96HP4	312 aa	Predicted RBP	12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	MRGPRX2	Q96LB1	330 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	DCBLD2	Q96PD2	775 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	CMKLR1	Q99788	373 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	FSD1L	Q9BXM9	530 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	EPB41L1	Q9H4G0	881 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SYNDIG1	Q9H7V2	258 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	SARS2	Q9NP81	518 aa	Known RBP	12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	UBP1	Q9NZI7	540 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	ADGRG1	Q9Y653	693 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	OAS3	Q9Y6K5	1087 aa	Known RBP	12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	BPTF	Q12830	3046 aa		12.46	□□□□□ -0.41
CDK5RAP3-222	ENST00000581708	LAMA5	O15230	3695 aa		12.46	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PTPRQ	Q9UMZ3	2332 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ZFC3H1	O60293	1989 aa	Known RBP	12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	HGS	O14964	777 aa	Predicted RBP	12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	KMO	O15229	486 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	B4GAT1	O43505	415 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ATP1A1	P05023	1023 aa	Known RBP	12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PIRT	P0C851	137 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PYGM	P11217	842 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	MAZ	P56270	477 aa	Known RBP	12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ITGA9	Q13797	1035 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	IYD	Q6PHW0	289 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	RANBP10	Q6VN20	620 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	B4GALNT4	Q76KP1	1039 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	MARK2	Q7KZI7	788 aa	Known RBP	12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	CHST15	Q7LFX5	561 aa	Predicted RBP	12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PDZD3	Q86UT5	571 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SLITRK4	Q8IW52	837 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	KLHDC8B	Q8IXV7	354 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	FBXO39	Q8N4B4	442 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	TTC30B	Q8N4P2	665 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708		Q8N9G6	341 aa	Predicted RBP	12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	CCDC112	Q8NEF3	446 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	OR4D9	Q8NGE8	314 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SPATA13	Q96N96	652 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	TIMM29	Q9BSF4	260 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ZCCHC2	Q9C0B9	1178 aa	Known RBP	12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SUDS3	Q9H7L9	328 aa	Predicted RBP	12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	EPB41L5	Q9HCM4	733 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	IL17C	Q9P0M4	197 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ATXN10	Q9UBB4	475 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SSUH2	Q9Y2M2	353 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PKP3	Q9Y446	797 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SPO11	Q9Y5K1	396 aa		12.45	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708		A0A1W2PNU3	283 aa	Predicted RBP	12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	MACROD2	A1Z1Q3	448 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	KLHL33	A6NCF5	533 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708		A6NCN8	305 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	C5orf60	A6NFR6	353 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	NVL	O15381	856 aa	Known RBP	12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	KRT86	O43790	486 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	TNFSF15	O95150	251 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PTMA	P06454	111 aa	Known RBP	12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	F3	P13726	295 aa		12.44	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms