RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 ITGB7P26010 798 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 ACRV1P26436 265 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 MMP12P39900 470 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 WASP42768 502 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 RGS19P49795 217 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 OCRLQ01968 901 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 NFATC2Q13469 925 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 ELAVL3Q14576 367 aaKnown RBP10.44□□□□□ -0.74
SS18-217ENST00000580958 ITIH4Q14624 930 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 FAM83EQ2M2I3 478 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 GPR33Q49SQ1 333 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 PREPLQ4J6C6 727 aaPredicted RBP10.44□□□□□ -0.74
SS18-217ENST00000580958 SETMARQ53H47 684 aaPredicted RBP10.44□□□□□ -0.74
SS18-217ENST00000580958 AGAP9Q5VTM2 703 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 LYPLAL1Q5VWZ2 237 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 ERAP2Q6P179 960 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 KLC3Q6P597 504 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 CERS6Q6ZMG9 384 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 NXPE1Q8N323 547 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 TMEM151AQ8N4L1 468 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 SGF29Q96ES7 293 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 UBXN10Q96LJ8 280 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 GAS2L1Q99501 681 aaPredicted RBP10.44□□□□□ -0.74
SS18-217ENST00000580958 MRPL57Q9BQC6 102 aaKnown RBP10.44□□□□□ -0.74
SS18-217ENST00000580958 BOCQ9BWV1 1114 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 P2RY12Q9H244 342 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 MRPL46Q9H2W6 279 aaKnown RBP10.44□□□□□ -0.74
SS18-217ENST00000580958 TAS2R13Q9NYV9 303 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 GALPQ9UBC7 116 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 SUN2Q9UH99 717 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 CD84Q9UIB8 345 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 TRMT6Q9UJA5 497 aaKnown RBP10.44□□□□□ -0.74
SS18-217ENST00000580958 PPM1HQ9ULR3 514 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 FAM50BQ9Y247 325 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 MED16Q9Y2X0 877 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 COMMD10Q9Y6G5 202 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 OAS3Q9Y6K5 1087 aaKnown RBP10.44□□□□□ -0.74
SS18-217ENST00000580958 PRSS21Q9Y6M0 314 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 STON1Q9Y6Q2 735 aa10.44□□□□□ -0.74
SS18-217ENST00000580958 TARM1B6A8C7 271 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 PRMT5O14744 637 aaPredicted RBP10.43□□□□□ -0.74
SS18-217ENST00000580958 SPINT1O43278 529 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 ITM2AO43736 263 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 TRIM13O60858 407 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 SNNO75324 88 aaPredicted RBP10.43□□□□□ -0.74
SS18-217ENST00000580958 ESR1P03372 595 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 PYGLP06737 847 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 EPHX1P07099 455 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 TROVE2P10155 538 aaKnown RBP eCLIP10.43□□□□□ -0.74
SS18-217ENST00000580958 CD1DP15813 335 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 ZNF37AP17032 561 aaPredicted RBP10.43□□□□□ -0.74
SS18-217ENST00000580958 ZNF7P17097 686 aaPredicted RBP10.43□□□□□ -0.74
SS18-217ENST00000580958 TFEBP19484 476 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 RPS3P23396 243 aaKnown RBP eCLIP10.43□□□□□ -0.74
SS18-217ENST00000580958 PPARGP37231 505 aaPredicted RBP10.43□□□□□ -0.74
SS18-217ENST00000580958 SLC26A3P40879 764 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 PSMD8P48556 350 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 SLC1A6P48664 564 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 SEC13P55735 322 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 ATP13A5Q4VNC0 1218 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 ZDHHC20Q5W0Z9 365 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 PAQR3Q6TCH7 311 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 C6orf89Q6UWU4 347 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 NUDT18Q6ZVK8 323 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 MMAAQ8IVH4 418 aaKnown RBP10.43□□□□□ -0.74
SS18-217ENST00000580958 RBFAQ8N0V3 343 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 SIDT2Q8NBJ9 832 aaKnown RBP10.43□□□□□ -0.74
SS18-217ENST00000580958 NAT14Q8WUY8 206 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 C10orf82Q8WW14 230 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 SREK1Q8WXA9 508 aaKnown RBP10.43□□□□□ -0.74
SS18-217ENST00000580958 C7orf26Q96N11 449 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 PLEKHG4BQ96PX9 1271 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 TTC1Q99614 292 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 SLC30A3Q99726 388 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 P2RY13Q9BPV8 354 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 SPATA16Q9BXB7 569 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 CLPBQ9H078 707 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 SYTL2Q9HCH5 934 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 NPHS2Q9NP85 383 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 PRSS16Q9NQE7 514 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 OXSMQ9NWU1 459 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 ZDHHC3Q9NYG2 299 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 KLHL14Q9P2G3 628 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 ITM2BQ9Y287 266 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 ARL2BPQ9Y2Y0 163 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 PCDHB1Q9Y5F3 818 aa10.43□□□□□ -0.74
SS18-217ENST00000580958 NUMA1Q14980 2115 aa10.42□□□□□ -0.74
SS18-217ENST00000580958 AGAP14A8MT82 685 aa10.42□□□□□ -0.74
SS18-217ENST00000580958 IQCF5A8MTL0 148 aa10.42□□□□□ -0.74
SS18-217ENST00000580958 E5RI56 91 aa10.42□□□□□ -0.74
SS18-217ENST00000580958 C1QTNF3-AMACRE9PGA6 284 aa10.42□□□□□ -0.74
SS18-217ENST00000580958 SPECC1L-ADORA2AF8WAN1 911 aa10.42□□□□□ -0.74
SS18-217ENST00000580958 K7EQS6 105 aa10.42□□□□□ -0.74
SS18-217ENST00000580958 MBTPS2O43462 519 aa10.42□□□□□ -0.74
SS18-217ENST00000580958 ZBTB14O43829 449 aa10.42□□□□□ -0.74
SS18-217ENST00000580958 DLX3O60479 287 aa10.42□□□□□ -0.74
SS18-217ENST00000580958 H2AFYO75367 372 aaKnown RBP10.42□□□□□ -0.74
SS18-217ENST00000580958 RBP1P09455 135 aa10.42□□□□□ -0.74
SS18-217ENST00000580958 ELFN1P0C7U0 828 aa10.42□□□□□ -0.74
SS18-217ENST00000580958 HNRNPLP14866 589 aaKnown RBP eCLIP10.42□□□□□ -0.741e-5■■■□□ 19.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms