RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 MAPK4P31152 587 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 RFC2P35250 354 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 OR1G1P47890 313 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 CCR5P51681 352 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 ATP12AP54707 1039 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 CASP9P55211 416 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 ADARP55265 1226 aaKnown RBP4.04□□□□□ -1.76
SMG8-205ENST00000580798 ATP5IP56385 69 aaPredicted RBP4.04□□□□□ -1.76
SMG8-205ENST00000580798 LOXL3P58215 753 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 LILRA4P59901 499 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 EIF3EP60228 445 aaKnown RBP4.04□□□□□ -1.76
SMG8-205ENST00000580798 TSPAN5P62079 268 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 PRAMEP78395 509 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 PPATQ06203 517 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.04□□□□□ -1.76
SMG8-205ENST00000580798 DDR1Q08345 913 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 IL24Q13007 206 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 TNFAIP1Q13829 316 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 CAPSQ13938 189 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 BTG3Q14201 252 aaPredicted RBP4.04□□□□□ -1.76
SMG8-205ENST00000580798 DAZAP2Q15038 168 aaPredicted RBP4.04□□□□□ -1.76
SMG8-205ENST00000580798 SEC23BQ15437 767 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 TRIP6Q15654 476 aaKnown RBP4.04□□□□□ -1.76
SMG8-205ENST00000580798 CNGA2Q16280 664 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 PLEKHS1Q5SXH7 462 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 ARHGAP40Q5TG30 622 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 ATG16L1Q676U5 607 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 SFRP4Q6FHJ7 346 aaPredicted RBP4.04□□□□□ -1.76
SMG8-205ENST00000580798 TRAT1Q6PIZ9 186 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 LAYNQ6UX15 382 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 RANBP10Q6VN20 620 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 CATSPERGQ6ZRH7 1159 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 STXBP4Q6ZWJ1 553 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 UNC13DQ70J99 1090 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 IRF2BP2Q7Z5L9 587 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.04□□□□□ -1.76
SMG8-205ENST00000580798 GLRX5Q86SX6 157 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 SIX6OS1Q8N1H7 587 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 SLC43A2Q8N370 569 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 GALNT16Q8N428 558 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 TDRD5Q8NAT2 981 aaKnown RBP4.04□□□□□ -1.76
SMG8-205ENST00000580798 OR52M1Q8NGK5 317 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 OR6S1Q8NH40 331 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 OR8K5Q8NH50 307 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 CYP2W1Q8TAV3 490 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 DNAJA4Q8WW22 397 aaPredicted RBP4.04□□□□□ -1.76
SMG8-205ENST00000580798 PTERQ96BW5 349 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 OPTNQ96CV9 577 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 ERO1AQ96HE7 468 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 C5orf34Q96MH7 638 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 CAMK1GQ96NX5 476 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 CCT7Q99832 543 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 LBHD1Q9BQE6 289 aaPredicted RBP4.04□□□□□ -1.76
SMG8-205ENST00000580798 LLPHQ9BRT6 129 aaKnown RBP4.04□□□□□ -1.76
SMG8-205ENST00000580798 FSD1LQ9BXM9 530 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 THAP2Q9H0W7 228 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 BRF2Q9HAW0 419 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 SPACA1Q9HBV2 294 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 PDGFCQ9NRA1 345 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 TMEM184CQ9NVA4 438 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 HCFC1R1Q9NWW0 138 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 FAM120CQ9NX05 1096 aaKnown RBP4.04□□□□□ -1.76
SMG8-205ENST00000580798 MARCH4Q9P2E8 410 aaPredicted RBP4.04□□□□□ -1.76
SMG8-205ENST00000580798 THEGQ9P2T0 379 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 STX18Q9P2W9 335 aaKnown RBP4.04□□□□□ -1.76
SMG8-205ENST00000580798 APPL1Q9UKG1 709 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 DDX19BQ9UMR2 479 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 ADAMTS5Q9UNA0 930 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 EXOC6BQ9Y2D4 811 aa4.04□□□□□ -1.76
SMG8-205ENST00000580798 RPH3AQ9Y2J0 694 aaPredicted RBP4.04□□□□□ -1.76
SMG8-205ENST00000580798 KANK1Q14678 1352 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 GOLGA6L9A6NEM1 432 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 AQP12BA6NM10 295 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 PDLIM1O00151 329 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 SOCS2O14508 198 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 OGTO15294 1046 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 HDAC3O15379 428 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 ADAM20O43506 726 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 CA12O43570 354 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 ACSL4O60488 711 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 FAM155BO75949 473 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 CAMTA2O94983 1202 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 AKR7A3O95154 331 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 PRAMEF12O95522 483 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 DIRAS3O95661 229 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 IL1AP01583 271 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 FHP07954 510 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 ALOX5P09917 674 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 NPSP0C0P6 89 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 ATXN1LP0C7T5 689 aaKnown RBP4.03□□□□□ -1.76
SMG8-205ENST00000580798 SUPT20HL2P0C7V6 817 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 PRPS2P11908 318 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 ANPEPP15144 967 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 POLR2EP19388 210 aaKnown RBP4.03□□□□□ -1.76
SMG8-205ENST00000580798 CASTP20810 708 aaKnown RBP4.03□□□□□ -1.76
SMG8-205ENST00000580798 PTAFRP25105 342 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 PCGF2P35227 344 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 MAGEA1P43355 309 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 PCP4P48539 62 aa4.03□□□□□ -1.76
SMG8-205ENST00000580798 HSPA13P48723 471 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms