RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 NDST3O95803 873 aa21.07■□□□□ 0.96
CSNK1D-215ENST00000580784 FASLGP48023 281 aa21.07■□□□□ 0.96
CSNK1D-215ENST00000580784 CLPPQ16740 277 aaPredicted RBP21.07■□□□□ 0.96
CSNK1D-215ENST00000580784 CCDC70Q6NSX1 233 aa21.07■□□□□ 0.96
CSNK1D-215ENST00000580784 CCDC81Q6ZN84 652 aa21.07■□□□□ 0.96
CSNK1D-215ENST00000580784 ZC3H18Q86VM9 953 aaKnown RBP21.07■□□□□ 0.96
CSNK1D-215ENST00000580784 CCDC170Q8IYT3 715 aa21.07■□□□□ 0.96
CSNK1D-215ENST00000580784 RCOR2Q8IZ40 523 aa21.07■□□□□ 0.96
CSNK1D-215ENST00000580784 LSM14AQ8ND56 463 aaKnown RBP21.07■□□□□ 0.96
CSNK1D-215ENST00000580784 SNRNP27Q8WVK2 155 aaKnown RBP21.07■□□□□ 0.96
CSNK1D-215ENST00000580784 P3H4Q92791 437 aa21.07■□□□□ 0.96
CSNK1D-215ENST00000580784 HAUS1Q96CS2 278 aa21.07■□□□□ 0.96
CSNK1D-215ENST00000580784 CCDC74BQ96LY2 380 aa21.07■□□□□ 0.96
CSNK1D-215ENST00000580784 RMI1Q9H9A7 625 aa21.07■□□□□ 0.96
CSNK1D-215ENST00000580784 ACSL6Q9UKU0 697 aa21.07■□□□□ 0.96
CSNK1D-215ENST00000580784 hCG_1818297A0A087WSY0 165 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 K7ENP7 123 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 AURKAO14965 403 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 EFSO43281 561 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 GRID2O43424 1007 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 NUAK1O60285 661 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 SLC25A14O95258 325 aaPredicted RBP21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 CCL4P13236 92 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 ZNF8P17098 575 aaPredicted RBP21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 NFKB1P19838 968 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 MPSTP25325 297 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 LIMK2P53671 638 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 SQSTM1Q13501 440 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 SPA17Q15506 151 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 ZNF569Q5MCW4 686 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 INO80CQ6PI98 192 aaPredicted RBP21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 CCDC50Q8IVM0 306 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 KRT35Q92764 455 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 CCNL2Q96S94 520 aaPredicted RBP21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 ZSCAN5AQ9BUG6 496 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 OR2AG1Q9H205 316 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 CARD9Q9H257 536 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 TRIM39Q9HCM9 518 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 FOXJ2Q9P0K8 574 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 TMEM9Q9P0T7 183 aa21.06■□□□□ 0.96
CSNK1D-215ENST00000580784 C9orf172C9J069 976 aa21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 F5H423 210 aaPredicted RBP21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 SNX2O60749 519 aa21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 BPIP17213 487 aa21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 CSF2RBP32927 897 aa21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 DCDC1P59894 354 aa21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 RHDQ02161 417 aa21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 C11orf63Q6NUN7 778 aa21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 IYDQ6PHW0 289 aa21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 ADGRG6Q86SQ4 1221 aa21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 ZFAND4Q86XD8 727 aa21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 TRAM1L1Q8N609 369 aa21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 OR4D9Q8NGE8 314 aa21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 SLC38A3Q99624 504 aa21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 HEMGNQ9BXL5 484 aa21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 BPIFA1Q9NP55 256 aa21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 RAD18Q9NS91 495 aa21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 AKAP7Q9P0M2 348 aaPredicted RBP21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 FAM153AQ9UHL3 310 aa21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 ADGRG1Q9Y653 693 aa21.05■□□□□ 0.96
CSNK1D-215ENST00000580784 LOC285095A0A1B0GVY8 99 aa21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 A6NCN8 305 aa21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 ERVH48-1M5A8F1 160 aa21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 HGSO14964 777 aaPredicted RBP21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 C1QL1O75973 258 aa21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 CYLC1P35663 651 aaPredicted RBP21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 ZNF75DP51815 510 aa21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 WNT3AP56704 352 aa21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 HHEXQ03014 270 aa21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 NFATC2Q13469 925 aa21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 NOMO1Q15155 1222 aa21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 TAF1BQ53T94 588 aaPredicted RBP21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 KDELC1Q6UW63 502 aa21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 PID1Q7Z2X4 250 aa21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 DAAM2Q86T65 1068 aa21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 ZNF567Q8N184 647 aa21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 GLYATL1Q969I3 302 aa21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 KLHL8Q9P2G9 620 aaPredicted RBP21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 NFKBIL1Q9UBC1 381 aaPredicted RBP21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 EPN1Q9Y6I3 576 aaPredicted RBP21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 GCN1Q92616 2671 aaKnown RBP21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 CFAP46Q8IYW2 2715 aa21.04■□□□□ 0.96
CSNK1D-215ENST00000580784 SDK2Q58EX2 2172 aa21.03■□□□□ 0.96
CSNK1D-215ENST00000580784 RCCD1A6NED2 376 aa21.03■□□□□ 0.96
CSNK1D-215ENST00000580784 SOWAHDA6NJG2 315 aa21.03■□□□□ 0.96
CSNK1D-215ENST00000580784 MTSS1O43312 755 aa21.03■□□□□ 0.96
CSNK1D-215ENST00000580784 LIPCP11150 499 aa21.03■□□□□ 0.96
CSNK1D-215ENST00000580784 FGF3P11487 239 aaPredicted RBP21.03■□□□□ 0.96
CSNK1D-215ENST00000580784 PPM1FP49593 454 aaPredicted RBP21.03■□□□□ 0.96
CSNK1D-215ENST00000580784 GPLD1P80108 840 aa21.03■□□□□ 0.96
CSNK1D-215ENST00000580784 SRSF6Q13247 344 aaKnown RBP21.03■□□□□ 0.96
CSNK1D-215ENST00000580784 TRA2AQ13595 282 aaKnown RBP eCLIP21.03■□□□□ 0.96
CSNK1D-215ENST00000580784 KIAA1614Q5VZ46 1190 aa21.03■□□□□ 0.96
CSNK1D-215ENST00000580784 TMEM71Q6P5X7 295 aa21.03■□□□□ 0.96
CSNK1D-215ENST00000580784 HTR3CQ8WXA8 447 aa21.03■□□□□ 0.96
CSNK1D-215ENST00000580784 AHCYL2Q96HN2 611 aaKnown RBP21.03■□□□□ 0.96
CSNK1D-215ENST00000580784 OXNAD1Q96HP4 312 aaPredicted RBP21.03■□□□□ 0.96
CSNK1D-215ENST00000580784 RBM41Q96IZ5 413 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms