RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	GUF1	Q8N442	669 aa	Known RBP	5.94	□□□□□ -1.46
KPNB1-209	ENST00000580158	OR6K2	Q8NGY2	324 aa		5.94	□□□□□ -1.46
KPNB1-209	ENST00000580158	DNAJB8	Q8NHS0	232 aa		5.94	□□□□□ -1.46
KPNB1-209	ENST00000580158	GOLGA5	Q8TBA6	731 aa		5.94	□□□□□ -1.46
KPNB1-209	ENST00000580158	CLEC4C	Q8WTT0	213 aa		5.94	□□□□□ -1.46
KPNB1-209	ENST00000580158	INPP5D	Q92835	1189 aa		5.94	□□□□□ -1.46
KPNB1-209	ENST00000580158	ISG20	Q96AZ6	181 aa	Known RBP	5.94	□□□□□ -1.46
KPNB1-209	ENST00000580158	EPSTI1	Q96J88	318 aa		5.94	□□□□□ -1.46
KPNB1-209	ENST00000580158	HSFY1	Q96LI6	401 aa		5.94	□□□□□ -1.46
KPNB1-209	ENST00000580158	SPON2	Q9BUD6	331 aa		5.94	□□□□□ -1.46
KPNB1-209	ENST00000580158	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	5.94	□□□□□ -1.46
KPNB1-209	ENST00000580158	EPB41L1	Q9H4G0	881 aa		5.94	□□□□□ -1.46
KPNB1-209	ENST00000580158	PDE7B	Q9NP56	450 aa		5.94	□□□□□ -1.46
KPNB1-209	ENST00000580158	DLL4	Q9NR61	685 aa		5.94	□□□□□ -1.46
KPNB1-209	ENST00000580158	OLAH	Q9NV23	265 aa		5.94	□□□□□ -1.46
KPNB1-209	ENST00000580158	SIDT1	Q9NXL6	827 aa	Known RBP	5.94	□□□□□ -1.46
KPNB1-209	ENST00000580158	SOX13	Q9UN79	622 aa		5.94	□□□□□ -1.46
KPNB1-209	ENST00000580158	EDAR	Q9UNE0	448 aa		5.94	□□□□□ -1.46
KPNB1-209	ENST00000580158	NBEAL1	Q6ZS30	2694 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	HCFC1	P51610	2035 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	TRBV23OR9-2	A0A075B6M9	112 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158		A0A0D9SEW6	157 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	C19orf84	I3L1E1	186 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	TOX3	O15405	576 aa	Predicted RBP	5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	TEX33	O43247	280 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	FYN	P06241	537 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	KLK3	P07288	261 aa	Predicted RBP	5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	ACPP	P15309	386 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	OR1E1	P30953	314 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	ACTR1B	P42025	376 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	KIR3DL1	P43629	444 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	GNPDA1	P46926	289 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	ARCN1	P48444	511 aa	Known RBP	5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	SEPHS1	P49903	392 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	NEK4	P51957	841 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	GEMIN4	P57678	1058 aa	Known RBP	5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	ANAPC15	P60006	121 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	ACTR1A	P61163	376 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	YWHAE	P62258	255 aa	Known RBP	5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	CSNK1G2	P78368	415 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	AMPD3	Q01432	767 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	HHEX	Q03014	270 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	MYBPC3	Q14896	1274 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	KNOP1	Q1ED39	458 aa	Known RBP	5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	MYLK3	Q32MK0	819 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	FAM26F	Q5R3K3	315 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	EXOSC6	Q5RKV6	272 aa	Known RBP	5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	SYPL2	Q5VXT5	272 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	DIEXF	Q68CQ4	756 aa	Known RBP	5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	ERAP2	Q6P179	960 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	PMF1	Q6P1K2	205 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	TMEM207	Q6UWW9	146 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	GFRAL	Q6UXV0	394 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	LRRC31	Q6UY01	552 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	BEND5	Q7L4P6	421 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	EPM2AIP1	Q7L775	607 aa	Predicted RBP	5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	TMEM200A	Q86VY9	491 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	CLEC1A	Q8NC01	280 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	PLA2G15	Q8NCC3	412 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	OR2AP1	Q8NGE2	309 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	ADAMTS17	Q8TE56	1095 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	SLC35F5	Q8WV83	523 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	MR1	Q95460	341 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	HMCES	Q96FZ2	354 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	SPATA32	Q96LK8	384 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	FER1L6-AS2	Q96M78	137 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	FCRL4	Q96PJ5	515 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	RUFY1	Q96T51	708 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	WDR77	Q9BQA1	342 aa	Predicted RBP	5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	TMPRSS13	Q9BYE2	586 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	ENKD1	Q9H0I2	346 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	SIK2	Q9H0K1	926 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	WDR26	Q9H7D7	661 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	FAM204A	Q9H8W3	233 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	ATP13A1	Q9HD20	1204 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	CCM2L	Q9NUG4	571 aa	Predicted RBP	5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	AJAP1	Q9UKB5	411 aa	Predicted RBP	5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	RARRES3	Q9UL19	164 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	KIAA1257	Q9ULG3	409 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	FRMD4B	Q9Y2L6	1034 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	HS3ST4	Q9Y661	456 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	NUP210L	Q5VU65	1888 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	ANKRD12	Q6UB98	2062 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	GTF3C1	Q12789	2109 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	INTS1	Q8N201	2190 aa	Known RBP	5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	COL6A5	A8TX70	2615 aa		5.93	□□□□□ -1.46
KPNB1-209	ENST00000580158	SYNJ2BP-COX16	A0A087WUM0	186 aa		5.92	□□□□□ -1.46
KPNB1-209	ENST00000580158	MASP2	O00187	686 aa		5.92	□□□□□ -1.46
KPNB1-209	ENST00000580158	EIF4EBP3	O60516	100 aa	Predicted RBP	5.92	□□□□□ -1.46
KPNB1-209	ENST00000580158	RASSF9	O75901	435 aa		5.92	□□□□□ -1.46
KPNB1-209	ENST00000580158	GSR	P00390	522 aa		5.92	□□□□□ -1.46
KPNB1-209	ENST00000580158	IGHE	P01854	428 aa		5.92	□□□□□ -1.46
KPNB1-209	ENST00000580158	HEXA	P06865	529 aa		5.92	□□□□□ -1.46
KPNB1-209	ENST00000580158	MYCLP1	P12525	358 aa	Predicted RBP	5.92	□□□□□ -1.46
KPNB1-209	ENST00000580158	ITIH2	P19823	946 aa		5.92	□□□□□ -1.46
KPNB1-209	ENST00000580158	TRIM23	P36406	574 aa		5.92	□□□□□ -1.46
KPNB1-209	ENST00000580158	TSFM	P43897	325 aa	Known RBP	5.92	□□□□□ -1.46
KPNB1-209	ENST00000580158	LIG3	P49916	1009 aa		5.92	□□□□□ -1.46
KPNB1-209	ENST00000580158	KCNK10	P57789	538 aa		5.92	□□□□□ -1.46
KPNB1-209	ENST00000580158	YBX1	P67809	324 aa	Known RBP	5.92	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms