RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 C2CD6Q53TS8 623 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 PLEKHS1Q5SXH7 462 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 RESP18Q5W5W9 173 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 GJB7Q6PEY0 223 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 BNIPLQ7Z465 357 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 MRGPREQ86SM8 312 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 SLC9B2Q86UD5 537 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 TSPAN33Q86UF1 283 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 SPATA3Q8NHX4 192 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 CHTF18Q8WVB6 975 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 HDAC11Q96DB2 347 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 CFAP57Q96MR6 1250 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 PLEKHG4BQ96PX9 1271 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 WDR77Q9BQA1 342 aaPredicted RBP10.89□□□□□ -0.67
GGA3-206ENST00000578773 PPP4R2Q9NY27 417 aa10.89□□□□□ -0.67
GGA3-206ENST00000578773 GTF3C1Q12789 2109 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 A0A1W2PQJ5 194 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 FAM221AA4D161 298 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 BECN2A8MW95 431 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 DNAJC6O75061 913 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 SCRG1O75711 98 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 LRIG2O94898 1065 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 LCA5LO95447 670 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 ATP1A1P05023 1023 aaKnown RBP10.88□□□□□ -0.67
GGA3-206ENST00000578773 ATXN8OSP0DMR3 200 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 PBX1P40424 430 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 TSFMP43897 325 aaKnown RBP10.88□□□□□ -0.67
GGA3-206ENST00000578773 CSNK1G2P78368 415 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 OTUD4Q01804 1114 aaKnown RBP10.88□□□□□ -0.67
GGA3-206ENST00000578773 ABRQ12979 859 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 CDC16Q13042 620 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 ZNF324BQ6AW86 544 aaPredicted RBP10.88□□□□□ -0.67
GGA3-206ENST00000578773 IRGCQ6NXR0 463 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 GALNT13Q8IUC8 556 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 CEP57L1Q8IYX8 460 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 TTC30BQ8N4P2 665 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 TSEN2Q8NCE0 465 aaKnown RBP10.88□□□□□ -0.67
GGA3-206ENST00000578773 ZNF397Q8NF99 534 aaPredicted RBP10.88□□□□□ -0.67
GGA3-206ENST00000578773 SNX21Q969T3 373 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 MTFMTQ96DP5 389 aaKnown RBP10.88□□□□□ -0.67
GGA3-206ENST00000578773 CNDP1Q96KN2 507 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 ZNF641Q96N77 438 aaPredicted RBP10.88□□□□□ -0.67
GGA3-206ENST00000578773 CXXC4Q9H2H0 198 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 PDFQ9HBH1 243 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 PDE7BQ9NP56 450 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 WASH6PQ9NQA3 447 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 OR12D3Q9UGF7 316 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 ZNHIT2Q9UHR6 403 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 PCDHA7Q9UN72 937 aa10.88□□□□□ -0.67
GGA3-206ENST00000578773 ANK3Q12955 4377 aaKnown RBP10.88□□□□□ -0.67
GGA3-206ENST00000578773 CPAMD8Q8IZJ3 1885 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 TRAFD1O14545 582 aaPredicted RBP10.87□□□□□ -0.67
GGA3-206ENST00000578773 PCDH17O14917 1159 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 CPNE3O75131 537 aaKnown RBP10.87□□□□□ -0.67
GGA3-206ENST00000578773 HEXIM1O94992 359 aaKnown RBP10.87□□□□□ -0.67
GGA3-206ENST00000578773 F3P13726 295 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 AMD1P17707 334 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 SLC19A1P41440 591 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 CAPZBP47756 277 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 RRADP55042 308 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 MARSP56192 900 aaKnown RBP10.87□□□□□ -0.67
GGA3-206ENST00000578773 APBA1Q02410 837 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 MEA1Q16626 185 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 PTCHD3Q3KNS1 767 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 SLC25A52Q3SY17 297 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 FOXD4L6Q3SYB3 417 aaPredicted RBP10.87□□□□□ -0.67
GGA3-206ENST00000578773 INO80DQ53TQ3 878 aaPredicted RBP10.87□□□□□ -0.67
GGA3-206ENST00000578773 FOXD4L3Q6VB84 417 aaPredicted RBP10.87□□□□□ -0.67
GGA3-206ENST00000578773 TMEM26Q6ZUK4 368 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 SRLQ86TD4 932 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 TMEM126BQ8IUX1 230 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 DSELQ8IZU8 1212 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 PYROXD2Q8N2H3 581 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 SIDT2Q8NBJ9 832 aaKnown RBP10.87□□□□□ -0.67
GGA3-206ENST00000578773 SHC3Q92529 594 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 SCAMP4Q969E2 229 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 SH3KBP1Q96B97 665 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 SLC41A2Q96JW4 573 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 ZNF514Q96K75 400 aaPredicted RBP10.87□□□□□ -0.67
GGA3-206ENST00000578773 TAAR6Q96RI8 345 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 STN1Q9H668 368 aaKnown RBP10.87□□□□□ -0.67
GGA3-206ENST00000578773 OLAHQ9NV23 265 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 ZNF624Q9P2J8 865 aaPredicted RBP10.87□□□□□ -0.67
GGA3-206ENST00000578773 SUCOQ9UBS9 1254 aaKnown RBP10.87□□□□□ -0.67
GGA3-206ENST00000578773 ZANQ9Y493 2812 aa10.87□□□□□ -0.67
GGA3-206ENST00000578773 CUBNO60494 3623 aa10.86□□□□□ -0.67
GGA3-206ENST00000578773 NPIPB15A6NHN6 443 aaPredicted RBP10.86□□□□□ -0.67
GGA3-206ENST00000578773 CETN3O15182 167 aa10.86□□□□□ -0.67
GGA3-206ENST00000578773 TOX3O15405 576 aaPredicted RBP10.86□□□□□ -0.67
GGA3-206ENST00000578773 MED7O43513 233 aa10.86□□□□□ -0.67
GGA3-206ENST00000578773 RAB40ALP0C0E4 278 aa10.86□□□□□ -0.67
GGA3-206ENST00000578773 RORAP35398 523 aa10.86□□□□□ -0.67
GGA3-206ENST00000578773 CA7P43166 264 aa10.86□□□□□ -0.67
GGA3-206ENST00000578773 GPR1P46091 355 aa10.86□□□□□ -0.67
GGA3-206ENST00000578773 ATP11AP98196 1134 aa10.86□□□□□ -0.67
GGA3-206ENST00000578773 PEX6Q13608 980 aa10.86□□□□□ -0.67
GGA3-206ENST00000578773 ZNF169Q14929 603 aaPredicted RBP10.86□□□□□ -0.67
GGA3-206ENST00000578773 ZFYVE27Q5T4F4 411 aa10.86□□□□□ -0.67
GGA3-206ENST00000578773 FBXO38Q6PIJ6 1188 aa10.86□□□□□ -0.67
GGA3-206ENST00000578773 MEX3BQ6ZN04 569 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms