RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 SSU72Q9NP77 194 aaKnown RBP10.16□□□□□ -0.78
SS18-210ENST00000578700 C20orf96Q9NUD7 363 aaPredicted RBP10.16□□□□□ -0.78
SS18-210ENST00000578700 PIH1D1Q9NWS0 290 aaKnown RBP10.16□□□□□ -0.78
SS18-210ENST00000578700 MOCS1Q9NZB8 636 aa10.16□□□□□ -0.78
SS18-210ENST00000578700 SCML1Q9UN30 329 aa10.16□□□□□ -0.78
SS18-210ENST00000578700 SOX13Q9UN79 622 aa10.16□□□□□ -0.78
SS18-210ENST00000578700 NYNRINQ9P2P1 1898 aaKnown RBP10.16□□□□□ -0.78
SS18-210ENST00000578700 HECTD1Q9ULT8 2610 aa10.16□□□□□ -0.78
SS18-210ENST00000578700 TTC34A8MYJ7 566 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 YKT6O15498 198 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 MT-CO3P00414 261 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 IL1BP01584 269 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 EPOP01588 193 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 FGF1P05230 155 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 CHN1P15882 459 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 TPH1P17752 444 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 KRT4P19013 534 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 HLA-DPA1P20036 260 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 GCAP28676 217 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 SPRP35270 261 aaPredicted RBP10.15□□□□□ -0.78
SS18-210ENST00000578700 CTSOP43234 321 aaPredicted RBP10.15□□□□□ -0.78
SS18-210ENST00000578700 SLC18A1P54219 525 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 NXPH1P58417 271 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 MAXP61244 160 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 RHOAP61586 193 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 DAB2P98082 770 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 INSM1Q01101 510 aaPredicted RBP10.15□□□□□ -0.78
SS18-210ENST00000578700 DSC2Q02487 901 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 TLE3Q04726 772 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 CDK18Q07002 472 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 ILF2Q12905 390 aaKnown RBP10.15□□□□□ -0.78
SS18-210ENST00000578700 THOC5Q13769 683 aaKnown RBP10.15□□□□□ -0.78
SS18-210ENST00000578700 EFTUD2Q15029 972 aaKnown RBP eCLIP10.15□□□□□ -0.785e-13■■■■■ 88.9
SS18-210ENST00000578700 UGP2Q16851 508 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 TBC1D25Q3MII6 688 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 POM121L1PQ3SYA9 428 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 ANKRD20A4Q4UJ75 823 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 INO80DQ53TQ3 878 aaPredicted RBP10.15□□□□□ -0.78
SS18-210ENST00000578700 RALGPS1Q5JS13 557 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 C9orf64Q5T6V5 341 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 BROXQ5VW32 411 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 CXorf57Q6NSI4 855 aaKnown RBP10.15□□□□□ -0.78
SS18-210ENST00000578700 RANBP10Q6VN20 620 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.15□□□□□ -0.78
SS18-210ENST00000578700 MARK2Q7KZI7 788 aaKnown RBP10.15□□□□□ -0.78
SS18-210ENST00000578700 KDELC2Q7Z4H8 507 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 PRPF39Q86UA1 669 aaKnown RBP10.15□□□□□ -0.78
SS18-210ENST00000578700 TMEM135Q86UB9 458 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 STK40Q8N2I9 435 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 AGGF1Q8N302 714 aaeCLIP10.15□□□□□ -0.78
SS18-210ENST00000578700 SLC25A41Q8N5S1 370 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.15□□□□□ -0.78
SS18-210ENST00000578700 ANKRD42Q8N9B4 389 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 FEM1CQ96JP0 617 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 RPL10LQ96L21 214 aaKnown RBP10.15□□□□□ -0.78
SS18-210ENST00000578700 MRGPRX2Q96LB1 330 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 FEM1AQ9BSK4 669 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 KIFC1Q9BW19 673 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 ADGRE3Q9BY15 652 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 NSRP1Q9H0G5 558 aaKnown RBP10.15□□□□□ -0.78
SS18-210ENST00000578700 ARNT2Q9HBZ2 717 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 CPNE5Q9HCH3 593 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 WDR70Q9NW82 654 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 EURLQ9NYK6 297 aa10.15□□□□□ -0.78
SS18-210ENST00000578700 CXorf51AA0A1B0GTR3 108 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 TRIM49D1C9J1S8 452 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 INSIG1O15503 277 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 PRPF4O43172 522 aaKnown RBP eCLIP10.14□□□□□ -0.79
SS18-210ENST00000578700 ZWINTO95229 277 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 MPOP05164 745 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 LSP1P33241 339 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 ADRA1AP35348 466 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 SCNN1BP51168 640 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 PDE1BQ01064 536 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 SLC20A2Q08357 652 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 NIPAL4Q0D2K0 466 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 LY6DQ14210 128 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 POU6F1Q14863 301 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 HNRNPA1L2Q32P51 320 aaKnown RBP10.14□□□□□ -0.79
SS18-210ENST00000578700 GLIPR1L2Q4G1C9 344 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 GRTP1Q5TC63 336 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 HHATQ5VTY9 493 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 TTC19Q6DKK2 380 aaPredicted RBP10.14□□□□□ -0.79
SS18-210ENST00000578700 ALG1LQ6GMV1 187 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 TRMT10BQ6PF06 316 aaKnown RBP10.14□□□□□ -0.79
SS18-210ENST00000578700 PCSK4Q6UW60 755 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 KDELC1Q6UW63 502 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 KCNMB4Q86W47 210 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 SPATS2Q86XZ4 545 aaKnown RBP10.14□□□□□ -0.79
SS18-210ENST00000578700 CYP4X1Q8N118 509 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 FIBINQ8TAL6 211 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 ARRDC2Q8TBH0 407 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 MGARPQ8TDB4 240 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 MYO19Q96H55 970 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 RANBP9Q96S59 729 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 FAM129BQ96TA1 746 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 CPNE1Q99829 537 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 MGME1Q9BQP7 344 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 FAM167BQ9BTA0 163 aa10.14□□□□□ -0.79
SS18-210ENST00000578700 CHRAC1Q9NRG0 131 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms