RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 LIPCP11150 499 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 CCL4P13236 92 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 ACP5P13686 325 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 PTPN3P26045 913 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 GPLD1P80108 840 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 CFHR1Q03591 330 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 TRA2AQ13595 282 aaKnown RBP eCLIP15.72■□□□□ 0.11
CRLF3-203ENST00000578692 PRKD1Q15139 912 aaPredicted RBP15.72■□□□□ 0.11
CRLF3-203ENST00000578692 ALS2CLQ60I27 953 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 TMEM71Q6P5X7 295 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 IYDQ6PHW0 289 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 SPOCD1Q6ZMY3 1216 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 P3H4Q92791 437 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 AHCYL2Q96HN2 611 aaKnown RBP15.72■□□□□ 0.11
CRLF3-203ENST00000578692 CCDC74BQ96LY2 380 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 SRPK1Q96SB4 655 aaKnown RBP15.72■□□□□ 0.11
CRLF3-203ENST00000578692 ZSCAN5AQ9BUG6 496 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 TRIM39Q9HCM9 518 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 ARFGAP3Q9NP61 516 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 UBP1Q9NZI7 540 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 TBC1D29Q9UFV1 150 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 KCNK6Q9Y257 313 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 ZNF711Q9Y462 761 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 ATRXP46100 2492 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 SMG1Q96Q15 3661 aaKnown RBP15.71■□□□□ 0.11
CRLF3-203ENST00000578692 PMPCBO75439 489 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 LCA5LO95447 670 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 PECAM1P16284 738 aaPredicted RBP15.71■□□□□ 0.11
CRLF3-203ENST00000578692 ZNF8P17098 575 aaPredicted RBP15.71■□□□□ 0.11
CRLF3-203ENST00000578692 MPSTP25325 297 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 PPM1FP49593 454 aaPredicted RBP15.71■□□□□ 0.11
CRLF3-203ENST00000578692 DCDC1P59894 354 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 HHEXQ03014 270 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 ADCY2Q08462 1091 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 TFDP3Q5H9I0 405 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 ZNF569Q5MCW4 686 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.71■□□□□ 0.11
CRLF3-203ENST00000578692 ZNF648Q5T619 568 aaPredicted RBP15.71■□□□□ 0.11
CRLF3-203ENST00000578692 KIAA1614Q5VZ46 1190 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 ZFAND4Q86XD8 727 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 ZNF761Q86XN6 746 aaPredicted RBP15.71■□□□□ 0.11
CRLF3-203ENST00000578692 CCDC170Q8IYT3 715 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 RCOR2Q8IZ40 523 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 TRAM1L1Q8N609 369 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 OR10G6Q8NH81 332 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 TTC9Q92623 222 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 SH3KBP1Q96B97 665 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 OR2AG1Q9H205 316 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 GOLPH3Q9H4A6 298 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 STN1Q9H668 368 aaKnown RBP15.71■□□□□ 0.11
CRLF3-203ENST00000578692 SARS2Q9NP81 518 aaKnown RBP15.71■□□□□ 0.11
CRLF3-203ENST00000578692 FOXJ2Q9P0K8 574 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 PCDHB11Q9Y5F2 797 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 PCDHA13Q9Y5I0 950 aa15.71■□□□□ 0.11
CRLF3-203ENST00000578692 MTSS1O43312 755 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 SNX2O60749 519 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 SLC4A1P02730 911 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 FGF3P11487 239 aaPredicted RBP15.7■□□□□ 0.1
CRLF3-203ENST00000578692 SLC2A4P14672 509 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 CD82P27701 267 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 CSTF2P33240 577 aaKnown RBP eCLIP15.7■□□□□ 0.1
CRLF3-203ENST00000578692 CD68P34810 354 aaPredicted RBP15.7■□□□□ 0.1
CRLF3-203ENST00000578692 WASHC5Q12768 1159 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 SPA17Q15506 151 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 PDPK2PQ6A1A2 396 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 PID1Q7Z2X4 250 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 ADGRG6Q86SQ4 1221 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 SLC9B2Q86UD5 537 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 ZC3H18Q86VM9 953 aaKnown RBP15.7■□□□□ 0.1
CRLF3-203ENST00000578692 DTX1Q86Y01 620 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 KATNAL2Q8IYT4 538 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 AGBL5Q8NDL9 886 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 GLYATL1Q969I3 302 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 TAAR9Q96RI9 348 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 HERPUD2Q9BSE4 406 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 TMEM9Q9P0T7 183 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 NFKBIL1Q9UBC1 381 aaPredicted RBP15.7■□□□□ 0.1
CRLF3-203ENST00000578692 FAM153AQ9UHL3 310 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 TFR2Q9UP52 801 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 ADGRG1Q9Y653 693 aa15.7■□□□□ 0.1
CRLF3-203ENST00000578692 hCG_1818297A0A087WSY0 165 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 KIR2DS5A0A0G2JLQ3 304 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 A0A0G2JNG1 304 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 LOC285095A0A1B0GVY8 99 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 A6NCN8 305 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 OR5K4A6NMS3 321 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 GPR89AB7ZAQ6 455 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 KIR2DS3K7RE56 304 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 AURKAO14965 403 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 CHUKO15111 745 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 GPR89BP0CG08 455 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 THRAP10827 490 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 F3P13726 295 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 BPIP17213 487 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 NFKB1P19838 968 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 CSF2RBP32927 897 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 CLCNKAP51800 687 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 NFATC2Q13469 925 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 KIR2DS5Q14953 304 aa15.69■□□□□ 0.1
CRLF3-203ENST00000578692 PHYKPLQ8IUZ5 450 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms