RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 CWF19L1Q69YN2 538 aaKnown RBP7.98□□□□□ -1.13
COPS3-215ENST00000578317 PDPK2PQ6A1A2 396 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.98□□□□□ -1.13
COPS3-215ENST00000578317 TECPR1Q7Z6L1 1165 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 TSPAN33Q86UF1 283 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 TRIM42Q8IWZ5 723 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 FLCNQ8NFG4 579 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 TSTD1Q8NFU3 115 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 OR4K2Q8NGD2 314 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 NKD1Q969G9 470 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 PLEKHG4BQ96PX9 1271 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 OMDQ99983 421 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 CCDC77Q9BR77 488 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 TMEM109Q9BVC6 243 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 VIPAS39Q9H9C1 493 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 PPCSQ9HAB8 311 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 SGK2Q9HBY8 427 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 APPL1Q9UKG1 709 aa7.98□□□□□ -1.13
COPS3-215ENST00000578317 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.98□□□□□ -1.13
COPS3-215ENST00000578317 MUC22E2RYF6 1773 aaPredicted RBP7.97□□□□□ -1.13
COPS3-215ENST00000578317 MYO18AQ92614 2054 aaKnown RBP7.97□□□□□ -1.13
COPS3-215ENST00000578317 TMEM221A6NGB7 291 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 FAM159BA6NKW6 160 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 AGAP14A8MT82 685 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 M0R296 226 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 PI15O43692 258 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 RNASEH2AO75792 299 aaKnown RBP7.97□□□□□ -1.13
COPS3-215ENST00000578317 RPP40O75818 363 aaKnown RBP7.97□□□□□ -1.13
COPS3-215ENST00000578317 VAPBO95292 243 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 ACSL3O95573 720 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 DCNP07585 359 aaKnown RBP7.97□□□□□ -1.13
COPS3-215ENST00000578317 BPIP17213 487 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 STX2P32856 288 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 TPMTP51580 245 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 EIF3BP55884 814 aaKnown RBP7.97□□□□□ -1.13
COPS3-215ENST00000578317 DCDC1P59894 354 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 XIAPP98170 497 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 DPTQ07507 201 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 MGAT5Q09328 741 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 ILF2Q12905 390 aaKnown RBP7.97□□□□□ -1.13
COPS3-215ENST00000578317 NAB1Q13506 487 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 SEPT6Q14141 434 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 STAT4Q14765 748 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 CASP8Q14790 479 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 POM121L1PQ3SYA9 428 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 GPR33Q49SQ1 333 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 ZNF468Q5VIY5 522 aaPredicted RBP7.97□□□□□ -1.13
COPS3-215ENST00000578317 NEPROQ6NW34 567 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 CES3Q6UWW8 571 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 ZNF765Q7L2R6 523 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 HDXQ7Z353 690 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 GALNT7Q86SF2 657 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 CNTN4Q8IWV2 1026 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 GPR150Q8NGU9 434 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 GABPB2Q8TAK5 448 aaPredicted RBP7.97□□□□□ -1.13
COPS3-215ENST00000578317 CALML6Q8TD86 181 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 HDAC10Q969S8 669 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 ZNF669Q96BR6 464 aaPredicted RBP7.97□□□□□ -1.13
COPS3-215ENST00000578317 CERS2Q96G23 380 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 DNAJC1Q96KC8 554 aaKnown RBP7.97□□□□□ -1.13
COPS3-215ENST00000578317 TBATAQ96M53 351 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 COQ10AQ96MF6 247 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 CYTH2Q99418 400 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 ROPN1BQ9BZX4 212 aaPredicted RBP7.97□□□□□ -1.13
COPS3-215ENST00000578317 CLEC4MQ9H2X3 399 aaPredicted RBP7.97□□□□□ -1.13
COPS3-215ENST00000578317 ACSS3Q9H6R3 686 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 VPS37BQ9H9H4 285 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 ROPN1Q9HAT0 212 aaPredicted RBP7.97□□□□□ -1.13
COPS3-215ENST00000578317 PREBQ9HCU5 417 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 IL26Q9NPH9 171 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 POLR3BQ9NW08 1133 aaPredicted RBP7.97□□□□□ -1.13
COPS3-215ENST00000578317 C2orf42Q9NWW7 574 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 DNAJB12Q9NXW2 375 aaKnown RBP7.97□□□□□ -1.13
COPS3-215ENST00000578317 PKD2L2Q9NZM6 624 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 VPS18Q9P253 973 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 SERGEFQ9UGK8 458 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 SLC2A6Q9UGQ3 507 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 KCTD3Q9Y597 815 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 NFS1Q9Y697 457 aa7.97□□□□□ -1.13
COPS3-215ENST00000578317 K7ESF4 209 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 NEMP1O14524 444 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 MAP2K7O14733 419 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 WNT9AO14904 365 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 ELFN1P0C7U0 828 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 BMP4P12644 408 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 ADPRHP54922 357 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 RPS21P63220 83 aaKnown RBP7.96□□□□□ -1.13
COPS3-215ENST00000578317 PRAMEP78395 509 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 PEX6Q13608 980 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 KLHL38Q2WGJ6 581 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 HSP90AA5PQ58FG0 334 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 TEDDM1Q5T9Z0 273 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 KIAA1161Q6NSJ0 714 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 TRMT10BQ6PF06 316 aaKnown RBP7.96□□□□□ -1.13
COPS3-215ENST00000578317 LRIG3Q6UXM1 1119 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 KIAA0408Q6ZU52 694 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 Q6ZVL8 140 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 HSD11B1LQ7Z5J1 315 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 SYT9Q86SS6 491 aa7.96□□□□□ -1.13
COPS3-215ENST00000578317 CROCCP2Q86T23 111 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms