RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 OAS2P29728 719 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 L1CAMP32004 1257 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 VIPR1P32241 457 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 CDH5P33151 784 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 RPL22P35268 128 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SOX11P35716 441 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 FOLR3P41439 243 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SUOXP51687 545 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 CLCN7P51798 805 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF132P52740 706 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 CLNS1AP54105 237 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MANFP55145 182 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SMIM11AP58511 58 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 LGALS3BPQ08380 585 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MRPL49Q13405 166 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 NAE1Q13564 534 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ELAVL3Q14576 367 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM187BQ17R55 369 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 DUOXA1Q1HG43 343 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MORN1Q5T089 497 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM180AQ6UWF9 173 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 Q6ZVU0 165 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM220AQ7Z4H9 259 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MRPL43Q8N983 215 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SMYD1Q8NB12 490 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 FBXO36Q8NEA4 188 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 VN1R2Q8NFZ6 395 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 OR4K2Q8NGD2 314 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 JPH3Q8WXH2 748 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 PNPLA2Q96AD5 504 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 PPCDCQ96CD2 204 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MTFMTQ96DP5 389 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 DGAT2Q96PD7 388 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 CLCC1Q96S66 551 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF670Q9BS34 389 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 AARSD1Q9BTE6 412 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ADAM33Q9BZ11 813 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 BCL2L14Q9BZR8 327 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 EPB41L4BQ9H329 900 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ANLNQ9NQW6 1124 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 PDLIM7Q9NR12 457 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SH3BGRL2Q9UJC5 107 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 PCDHGC4Q9Y5F7 938 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 EFCAB7A8K855 629 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 C2orf74A8MZ97 194 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 PRAMEF26H0Y7S4 382 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MATN2O00339 956 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 TGM5O43548 720 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 USP12O75317 370 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 PRAMEF1O95521 474 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 OTCP00480 354 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 P04436 131 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 PRLRP16471 622 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 KDELR1P24390 212 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 CHRNB4P30926 498 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 DAOAP59103 153 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 RPS24P62847 133 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 DLG4P78352 724 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 PLP2Q04941 152 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MSLNQ13421 630 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 NAB1Q13506 487 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC1A5Q15758 541 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MYLK3Q32MK0 819 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC10A6Q3KNW5 377 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM153CQ494X1 144 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 FUT11Q495W5 492 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 FGD3Q5JSP0 725 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 TCEAL6Q6IPX3 200 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 KIAA1161Q6NSJ0 714 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ANKRD54Q6NXT1 300 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 IYDQ6PHW0 289 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 TXNDC11Q6PKC3 985 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 CASP12Q6UXS9 341 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 APTXQ7Z2E3 356 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC26A11Q86WA9 606 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 C1orf127Q8N9H9 656 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM13CQ8NE31 585 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM174AQ8TBP5 190 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 C7orf43Q8WVR3 580 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SEC14L1Q92503 715 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 INPP5DQ92835 1189 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 DNASE1L2Q92874 299 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC35C1Q96A29 364 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 RMND5BQ96G75 393 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 NSMCE3Q96MG7 304 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 PLEKHG4BQ96PX9 1271 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF607Q96SK3 696 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MIPEPQ99797 713 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 CPNE1Q99829 537 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SHCBP1LQ9BZQ2 653 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ALG2Q9H553 416 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 MANSC1Q9H8J5 431 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ERVK-5Q9HDB9 667 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC39A1Q9NY26 324 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 RCOR3Q9P2K3 495 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 KCND3Q9UK17 655 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 ANGPT4Q9Y264 503 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 TLR6Q9Y2C9 796 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 HCFC2Q9Y5Z7 792 aa2.91□□□□□ -1.94
SMCHD1-203ENST00000577880 STON1Q9Y6Q2 735 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms