RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 SLC23A2Q9UGH3 650 aa11.78□□□□□ -0.52
LITAF-219ENST00000576334 LOXL2Q9Y4K0 774 aa11.78□□□□□ -0.52
LITAF-219ENST00000576334 ATRXP46100 2492 aa11.78□□□□□ -0.52
LITAF-219ENST00000576334 EFSO43281 561 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 SNX2O60749 519 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 NDST3O95803 873 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 PNLIPP16233 465 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 FECHP22830 423 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 RBL1P28749 1068 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 CCKBRP32239 447 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 CYLC1P35663 651 aaPredicted RBP11.77□□□□□ -0.53
LITAF-219ENST00000576334 NR2C2P49116 596 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 MAPK10P53779 464 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 WNT3AP56704 352 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 CLN3Q13286 438 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 SIRPB2Q5JXA9 342 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 C11orf63Q6NUN7 778 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 PID1Q7Z2X4 250 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 ADGRG6Q86SQ4 1221 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 CLEC14AQ86T13 490 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 RCOR2Q8IZ40 523 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 NAT14Q8WUY8 206 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 GRAMD1AQ96CP6 724 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 MRFAP1L1Q96HT8 127 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 MRGPRX2Q96LB1 330 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 TMEM74Q96NL1 305 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 PANX2Q96RD6 677 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 GPR63Q9BZJ6 419 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 STRADBQ9C0K7 418 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 MAGEE1Q9HCI5 957 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 PRDM8Q9NQV8 689 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 FOXJ2Q9P0K8 574 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 KLHL8Q9P2G9 620 aaPredicted RBP11.77□□□□□ -0.53
LITAF-219ENST00000576334 DNPEPQ9ULA0 475 aa11.77□□□□□ -0.53
LITAF-219ENST00000576334 IGHV1OR21-1A0A087WYE8 117 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 PRAMEF33A0A0G2JMD5 474 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 IGHV5-10-1A0A0J9YXX1 117 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 LOC285095A0A1B0GVY8 99 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 GRID2IPA4D2P6 1211 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 C9orf172C9J069 976 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 GRID2O43424 1007 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 NUAK1O60285 661 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 PRAMEF10O60809 474 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 SLC25A14O95258 325 aaPredicted RBP11.76□□□□□ -0.53
LITAF-219ENST00000576334 CPNE6O95741 557 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 ITGA2BP08514 1039 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 JMJD7P0C870 316 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 CTNNA1P35221 906 aaKnown RBP11.76□□□□□ -0.53
LITAF-219ENST00000576334 ARSDP51689 593 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 NAP1L1P55209 391 aaKnown RBP11.76□□□□□ -0.53
LITAF-219ENST00000576334 OTUD4Q01804 1114 aaKnown RBP11.76□□□□□ -0.53
LITAF-219ENST00000576334 NFATC2Q13469 925 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 BIRC2Q13490 618 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 NR1D2Q14995 579 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 ATP13A5Q4VNC0 1218 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 BBS12Q6ZW61 710 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 PIM3Q86V86 326 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 ZFAND4Q86XD8 727 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 TMEM139Q8IV31 216 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 SFRP1Q8N474 314 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 TTC30BQ8N4P2 665 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 IPMKQ8NFU5 416 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 HTR3CQ8WXA8 447 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 ALG3Q92685 438 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 USP7Q93009 1102 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 RNF31Q96EP0 1072 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 CCDC74BQ96LY2 380 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 QKIQ96PU8 341 aaKnown RBP eCLIP11.76□□□□□ -0.537e-9■■■■■ 34.6
LITAF-219ENST00000576334 DESI2Q9BSY9 194 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 SCHIP1Q9P0W5 487 aaPredicted RBP11.76□□□□□ -0.53
LITAF-219ENST00000576334 VPS18Q9P253 973 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 FAM153AQ9UHL3 310 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 PACSIN2Q9UNF0 486 aaPredicted RBP11.76□□□□□ -0.53
LITAF-219ENST00000576334 ADGRG1Q9Y653 693 aa11.76□□□□□ -0.53
LITAF-219ENST00000576334 MACROD2A1Z1Q3 448 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 A6NCN8 305 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 A8MU76 341 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 H7C0C1 242 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 UGT1A9O60656 530 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 C1QL1O75973 258 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 AGTP01019 485 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 PYGLP06737 847 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 PYGMP11217 842 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 UGT1A6P19224 532 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 UGT1A1P22309 533 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 UGT1A4P22310 534 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 UGT1A3P35503 534 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 ATP5OP48047 213 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 SEPT7Q16181 437 aaKnown RBP11.75□□□□□ -0.53
LITAF-219ENST00000576334 ZNF569Q5MCW4 686 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 KIAA1614Q5VZ46 1190 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 IYDQ6PHW0 289 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 GPR155Q7Z3F1 870 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 ZNF547Q8IVP9 402 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 LRRC57Q8N9N7 239 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 SPC24Q8NBT2 197 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 ACTL9Q8TC94 416 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 BLOC1S5Q8TDH9 187 aa11.75□□□□□ -0.53
LITAF-219ENST00000576334 JPH3Q8WXH2 748 aaPredicted RBP11.75□□□□□ -0.53
LITAF-219ENST00000576334 GLYATL1Q969I3 302 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms