RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 SYTL2Q9HCH5 934 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 AIG1Q9NVV5 245 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 CLEC11AQ9Y240 323 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 A0A1W2PPW3 197 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 PRSS56P0CW18 603 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 PRDX3P30048 256 aaKnown RBP15.54■□□□□ 0.08
NUP88-207ENST00000573584 STC1P52823 247 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 NEDD8Q15843 81 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 ANKDD1AQ495B1 522 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 FGD3Q5JSP0 725 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 SDHAF4Q5VUM1 108 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 SCIMPQ6UWF3 145 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 ZNF599Q96NL3 588 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 DOK1Q99704 481 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 SLC30A3Q99726 388 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 PAIP1Q9H074 479 aaKnown RBP15.54■□□□□ 0.08
NUP88-207ENST00000573584 FAIMQ9NVQ4 179 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 TTC3P53804 2025 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 NCF1BA6NI72 391 aaPredicted RBP15.54■□□□□ 0.08
NUP88-207ENST00000573584 NCF1CA8MVU1 366 aaPredicted RBP15.54■□□□□ 0.08
NUP88-207ENST00000573584 F8W810 466 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 EEDO75530 441 aaKnown RBP15.54■□□□□ 0.08
NUP88-207ENST00000573584 CHRNA1P02708 482 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 NCF1P14598 390 aaPredicted RBP15.54■□□□□ 0.08
NUP88-207ENST00000573584 PURAQ00577 322 aaKnown RBP15.54■□□□□ 0.08
NUP88-207ENST00000573584 TNK2Q07912 1038 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 GRIK2Q13002 908 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 POLD3Q15054 466 aaPredicted RBP15.54■□□□□ 0.08
NUP88-207ENST00000573584 TSNQ15631 228 aaKnown RBP15.54■□□□□ 0.08
NUP88-207ENST00000573584 NANOGP8Q6NSW7 305 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 MON1AQ86VX9 555 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 BRSK1Q8TDC3 778 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 IGSF8Q969P0 613 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 BIRC7Q96CA5 298 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 CHID1Q9BWS9 393 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 NAA50Q9GZZ1 169 aaKnown RBP15.54■□□□□ 0.08
NUP88-207ENST00000573584 NANOGQ9H9S0 305 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 LEF1Q9UJU2 399 aaPredicted RBP15.54■□□□□ 0.08
NUP88-207ENST00000573584 IKZF3Q9UKT9 509 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 USP22Q9UPT9 525 aa15.54■□□□□ 0.08
NUP88-207ENST00000573584 TYW5A2RUC4 315 aaKnown RBP15.53■□□□□ 0.08
NUP88-207ENST00000573584 ECI2O75521 394 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 FGF1P05230 155 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 PRR35P0CG20 571 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 HLA-DPA1P20036 260 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 FMO4P31512 558 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 PBX3P40426 434 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 ZFP36L2P47974 494 aaKnown RBP15.53■□□□□ 0.08
NUP88-207ENST00000573584 POLR2JP52435 117 aaKnown RBP15.53■□□□□ 0.08
NUP88-207ENST00000573584 EEFSECP57772 596 aaKnown RBP15.53■□□□□ 0.08
NUP88-207ENST00000573584 TIGD2Q4W5G0 525 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 AARS2Q5JTZ9 985 aaKnown RBP15.53■□□□□ 0.08
NUP88-207ENST00000573584 MRPL10Q7Z7H8 261 aaKnown RBP15.53■□□□□ 0.08
NUP88-207ENST00000573584 TMEM199Q8N511 208 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 TERB1Q8NA31 727 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 PEX13Q92968 403 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 RNF145Q96MT1 663 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 C1orf50Q9BV19 199 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 DERL2Q9GZP9 239 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 POLR1EQ9GZS1 481 aaKnown RBP15.53■□□□□ 0.08
NUP88-207ENST00000573584 TAS2R13Q9NYV9 303 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 ZNF510Q9Y2H8 683 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 RAMP2O60895 175 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 CHEK2O96017 543 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 OGNP20774 298 aaKnown RBP15.53■□□□□ 0.08
NUP88-207ENST00000573584 SLC39A12Q504Y0 691 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 OTUD3Q5T2D3 398 aaPredicted RBP15.53■□□□□ 0.08
NUP88-207ENST00000573584 CCNYL2Q5T2Q4 361 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 FBXL22Q6P050 247 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 TBPL2Q6SJ96 375 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 USP51Q70EK9 711 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 GIPC3Q8TF64 312 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 OSCP1Q8WVF1 389 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 PARK7Q99497 189 aaKnown RBP15.53■□□□□ 0.08
NUP88-207ENST00000573584 BDH2Q9BUT1 245 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 YTHDF1Q9BYJ9 559 aaKnown RBP15.53■□□□□ 0.08
NUP88-207ENST00000573584 TBC1D23Q9NUY8 699 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 INTS7Q9NVH2 962 aaKnown RBP15.53■□□□□ 0.08
NUP88-207ENST00000573584 TBCCD1Q9NVR7 557 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 ABI2Q9NYB9 513 aaPredicted RBP15.53■□□□□ 0.08
NUP88-207ENST00000573584 SUN2Q9UH99 717 aa15.53■□□□□ 0.08
NUP88-207ENST00000573584 CDC7O00311 574 aa15.52■□□□□ 0.08
NUP88-207ENST00000573584 KPNA6O60684 536 aa15.52■□□□□ 0.08
NUP88-207ENST00000573584 SNX2O60749 519 aa15.52■□□□□ 0.08
NUP88-207ENST00000573584 C1RP00736 705 aa15.52■□□□□ 0.08
NUP88-207ENST00000573584 ADARB1P78563 741 aaKnown RBP15.52■□□□□ 0.08
NUP88-207ENST00000573584 YWHAHQ04917 246 aaPredicted RBP15.52■□□□□ 0.08
NUP88-207ENST00000573584 RAD51Q06609 339 aa15.52■□□□□ 0.08
NUP88-207ENST00000573584 IL10RBQ08334 325 aa15.52■□□□□ 0.08
NUP88-207ENST00000573584 EFEMP1Q12805 493 aa15.52■□□□□ 0.08
NUP88-207ENST00000573584 CCL14Q16627 93 aa15.52■□□□□ 0.08
NUP88-207ENST00000573584 SYVN1Q86TM6 617 aa15.52■□□□□ 0.08
NUP88-207ENST00000573584 CIR1Q86X95 450 aaPredicted RBP15.52■□□□□ 0.08
NUP88-207ENST00000573584 CDKN2AIPNLQ96HQ2 116 aa15.52■□□□□ 0.08
NUP88-207ENST00000573584 ACOX2Q99424 681 aa15.52■□□□□ 0.08
NUP88-207ENST00000573584 CCDC68Q9H2F9 335 aa15.52■□□□□ 0.08
NUP88-207ENST00000573584 IFT80Q9P2H3 777 aaPredicted RBP15.52■□□□□ 0.08
NUP88-207ENST00000573584 CEP350Q5VT06 3117 aa15.52■□□□□ 0.08
NUP88-207ENST00000573584 DYTNA2CJ06 578 aa15.52■□□□□ 0.07
NUP88-207ENST00000573584 LCHNA4D1U4 455 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms