RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 RPS3P23396 243 aaKnown RBP eCLIP13.58□□□□□ -0.24
CCDC40-209ENST00000573474 CA5AP35218 305 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 RPA3P35244 121 aaPredicted RBP13.58□□□□□ -0.24
CCDC40-209ENST00000573474 DGKEP52429 567 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 DPTQ07507 201 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 FZD5Q13467 585 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 SEPT7Q16181 437 aaKnown RBP13.58□□□□□ -0.24
CCDC40-209ENST00000573474 INSCQ1MX18 579 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 TAF1BQ53T94 588 aaPredicted RBP13.58□□□□□ -0.24
CCDC40-209ENST00000573474 PPM1JQ5JR12 505 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 Q6ZS52 159 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 SYT13Q7L8C5 426 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 LCA5Q86VQ0 697 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 ANKRD42Q8N9B4 389 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 TCP10LQ8TDR4 215 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 CENPTQ96BT3 561 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 NUS1Q96E22 293 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 BIRC8Q96P09 236 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 OLFM1Q99784 485 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 CLPBQ9H078 707 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 IQCGQ9H095 443 aaKnown RBP13.58□□□□□ -0.24
CCDC40-209ENST00000573474 P2RY12Q9H244 342 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 INTS9Q9NV88 658 aaKnown RBP13.58□□□□□ -0.24
CCDC40-209ENST00000573474 SMOXQ9NWM0 555 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 ADAM21Q9UKJ8 722 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 GRID1Q9ULK0 1009 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 COQ6Q9Y2Z9 468 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 ACOT9Q9Y305 439 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 PCDHB1Q9Y5F3 818 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 PRUNE2Q8WUY3 3088 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 SCN8AQ9UQD0 1980 aa13.58□□□□□ -0.24
CCDC40-209ENST00000573474 A0A087X1B8 175 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 A6NNZ2 444 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 H3BMM5 538 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 PLRG1O43660 514 aaKnown RBP13.57□□□□□ -0.24
CCDC40-209ENST00000573474 GLRA3O75311 464 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 TM7SF2O76062 418 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 RHOBTB1O94844 696 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 COL6A2P12110 1019 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 NDUFV2P19404 249 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 CD9P21926 228 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 FDXRP22570 491 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 MDH1P40925 334 aaKnown RBP13.57□□□□□ -0.24
CCDC40-209ENST00000573474 CDKN2DP55273 166 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 PPARDQ03181 441 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 TUBB8Q3ZCM7 444 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 SETMARQ53H47 684 aaPredicted RBP13.57□□□□□ -0.24
CCDC40-209ENST00000573474 KIAA1324Q6UXG2 1013 aaKnown RBP13.57□□□□□ -0.24
CCDC40-209ENST00000573474 CEP97Q8IW35 865 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 OR14C36Q8NHC7 312 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 HEXDCQ8WVB3 486 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 ASB2Q96Q27 587 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 VPS35Q96QK1 796 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 COPS8Q99627 209 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 OSBPL6Q9BZF3 934 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 KDM4CQ9H3R0 1056 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 POPDC3Q9HBV1 291 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 PREBQ9HCU5 417 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 TAS2R13Q9NYV9 303 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.57□□□□□ -0.24
CCDC40-209ENST00000573474 TMPRSS11EQ9UL52 423 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 PLLPQ9Y342 182 aa13.57□□□□□ -0.24
CCDC40-209ENST00000573474 ZNF106Q9H2Y7 1883 aaKnown RBP13.57□□□□□ -0.24
CCDC40-209ENST00000573474 ATG2BQ96BY7 2078 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 IGLV3-16A0A075B6K0 115 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 IGLON5A6NGN9 336 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 PHGDHO43175 533 aaKnown RBP13.56□□□□□ -0.24
CCDC40-209ENST00000573474 PYGLP06737 847 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 SLC35E2BP0CK96 405 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 GABRG2P18507 467 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 SLC26A3P40879 764 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 NSG1P42857 185 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 RPS21P63220 83 aaKnown RBP13.56□□□□□ -0.24
CCDC40-209ENST00000573474 CBX1P83916 185 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 TIAL1Q01085 375 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCDC40-209ENST00000573474 AGERQ15109 404 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 CTSL3PQ5NE16 218 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 LDLRAP1Q5SW96 308 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 GPRC6AQ5T6X5 926 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 HHATQ5VTY9 493 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 PTRHD1Q6GMV3 140 aaKnown RBP13.56□□□□□ -0.24
CCDC40-209ENST00000573474 KIAA1161Q6NSJ0 714 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 NEK5Q6P3R8 708 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 MACC1Q6ZN28 852 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 TRIM67Q6ZTA4 783 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 CDHR3Q6ZTQ4 885 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 CLEC14AQ86T13 490 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 GJD3Q8N144 294 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 MGARPQ8TDB4 240 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 BTN2A2Q8WVV5 523 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 HMGB4Q8WW32 186 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 DCUN1D1Q96GG9 259 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 TSNARE1Q96NA8 513 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 BOCQ9BWV1 1114 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 CAPS2Q9BXY5 557 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 FOXQ1Q9C009 403 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 TBC1D17Q9HA65 648 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 SLC17A7Q9P2U7 560 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 GNPTGQ9UJJ9 305 aa13.56□□□□□ -0.24
CCDC40-209ENST00000573474 FADS2P1A8MWK0 482 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms