RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 TTC25Q96NG3 672 aa7.73□□□□□ -1.17
SMG6-211ENST00000572369 NAP1L3Q99457 506 aaPredicted RBP7.73□□□□□ -1.17
SMG6-211ENST00000572369 AGAP2Q99490 1192 aa7.73□□□□□ -1.17
SMG6-211ENST00000572369 ZSCAN5AQ9BUG6 496 aa7.73□□□□□ -1.17
SMG6-211ENST00000572369 LRRC61Q9BV99 259 aa7.73□□□□□ -1.17
SMG6-211ENST00000572369 SEMA4CQ9C0C4 833 aa7.73□□□□□ -1.17
SMG6-211ENST00000572369 TRABDQ9H4I3 376 aa7.73□□□□□ -1.17
SMG6-211ENST00000572369 LRRC40Q9H9A6 602 aa7.73□□□□□ -1.17
SMG6-211ENST00000572369 FGF22Q9HCT0 170 aa7.73□□□□□ -1.17
SMG6-211ENST00000572369 HOMER3Q9NSC5 361 aa7.73□□□□□ -1.17
SMG6-211ENST00000572369 NCKIPSDQ9NZQ3 722 aa7.73□□□□□ -1.17
SMG6-211ENST00000572369 SIRPGQ9P1W8 387 aa7.73□□□□□ -1.17
SMG6-211ENST00000572369 GULP1Q9UBP9 304 aa7.73□□□□□ -1.17
SMG6-211ENST00000572369 ZNHIT2Q9UHR6 403 aa7.73□□□□□ -1.17
SMG6-211ENST00000572369 GPR34Q9UPC5 381 aa7.73□□□□□ -1.17
SMG6-211ENST00000572369 ZKSCAN5Q9Y2L8 839 aa7.73□□□□□ -1.17
SMG6-211ENST00000572369 TMEM98Q9Y2Y6 226 aa7.73□□□□□ -1.17
SMG6-211ENST00000572369 SPO11Q9Y5K1 396 aa7.73□□□□□ -1.17
SMG6-211ENST00000572369 KNL1Q8NG31 2342 aa7.73□□□□□ -1.17
SMG6-211ENST00000572369 ITPR2Q14571 2701 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 CPED1A4D0V7 1026 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 LMO7DNF2Z398 122 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 TPP1O14773 563 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 AURKAO14965 403 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 YY2O15391 372 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 METTL18O95568 372 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 CRTAMO95727 393 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 ATP1A1P05023 1023 aaKnown RBP7.72□□□□□ -1.17
SMG6-211ENST00000572369 CEACAM5P06731 702 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 CELA2BP08218 269 aaPredicted RBP7.72□□□□□ -1.17
SMG6-211ENST00000572369 LPOP22079 712 aaPredicted RBP7.72□□□□□ -1.17
SMG6-211ENST00000572369 HMGCLP35914 325 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 FDFT1P37268 417 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 SPAM1P38567 509 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 POLD2P49005 469 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 DCDC1P59894 354 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 GNG11P61952 73 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 PDE1BQ01064 536 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 OLIG2Q13516 323 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 PEX6Q13608 980 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 GTF2H3Q13889 308 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 SEPT6Q14141 434 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 LY6DQ14210 128 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 NR0B2Q15466 257 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 CDKN3Q16667 212 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 HENMT1Q5T8I9 393 aaKnown RBP7.72□□□□□ -1.17
SMG6-211ENST00000572369 ZDHHC20Q5W0Z9 365 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 DHRS13Q6UX07 377 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 ZNF574Q6ZN55 896 aaPredicted RBP7.72□□□□□ -1.17
SMG6-211ENST00000572369 NYAP1Q6ZVC0 841 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 KANSL1Q7Z3B3 1105 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 PRICKLE2Q7Z3G6 844 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 SLCO6A1Q86UG4 719 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 NLRP8Q86W28 1048 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 GALNT13Q8IUC8 556 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 PHYKPLQ8IUZ5 450 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 SDR16C5Q8N3Y7 309 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 TRAM1L1Q8N609 369 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 PDCD7Q8N8D1 485 aaKnown RBP7.72□□□□□ -1.17
SMG6-211ENST00000572369 DNAAF3Q8N9W5 541 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 FAM46DQ8NEK8 389 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 TBATAQ96M53 351 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 PLEKHG4BQ96PX9 1271 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 GSDMCQ9BYG8 508 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 FRMD8Q9BZ67 464 aaPredicted RBP7.72□□□□□ -1.17
SMG6-211ENST00000572369 TRIM4Q9C037 500 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 CLPBQ9H078 707 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 TMEM168Q9H0V1 697 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 ABCG4Q9H172 646 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 DPEP2Q9H4A9 486 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 SYNDIG1Q9H7V2 258 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 RAB6BQ9NRW1 208 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.72□□□□□ -1.17
SMG6-211ENST00000572369 PAK5Q9P286 719 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 PNMA8BQ9ULN7 279 aaPredicted RBP7.72□□□□□ -1.17
SMG6-211ENST00000572369 SUFUQ9UMX1 484 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 DGKBQ9Y6T7 804 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 USP9YO00507 2555 aaPredicted RBP7.72□□□□□ -1.17
SMG6-211ENST00000572369 CABIN1Q9Y6J0 2220 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 MYLKQ15746 1914 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 PCNX2A6NKB5 2137 aa7.72□□□□□ -1.17
SMG6-211ENST00000572369 GOLGA6L10A0A0M3HER8 536 aa7.71□□□□□ -1.18
SMG6-211ENST00000572369 GLYATL1P3A0A0U1RQE8 302 aa7.71□□□□□ -1.18
SMG6-211ENST00000572369 USP27XA6NNY8 438 aa7.71□□□□□ -1.18
SMG6-211ENST00000572369 ERI2A8K979 691 aaKnown RBP7.71□□□□□ -1.18
SMG6-211ENST00000572369 FADS2P1A8MWK0 482 aa7.71□□□□□ -1.18
SMG6-211ENST00000572369 B4DGG1 531 aa7.71□□□□□ -1.18
SMG6-211ENST00000572369 PGRMC1O00264 195 aaKnown RBP7.71□□□□□ -1.18
SMG6-211ENST00000572369 PPFIA2O75334 1257 aa7.71□□□□□ -1.18
SMG6-211ENST00000572369 SOD1P00441 154 aa7.71□□□□□ -1.18
SMG6-211ENST00000572369 IVLP07476 585 aa7.71□□□□□ -1.18
SMG6-211ENST00000572369 APRTP07741 180 aa7.71□□□□□ -1.18
SMG6-211ENST00000572369 CDK4P11802 303 aa7.71□□□□□ -1.18
SMG6-211ENST00000572369 MYF5P13349 255 aa7.71□□□□□ -1.18
SMG6-211ENST00000572369 ETS1P14921 441 aa7.71□□□□□ -1.18
SMG6-211ENST00000572369 BPIP17213 487 aa7.71□□□□□ -1.18
SMG6-211ENST00000572369 ACP1P24666 158 aa7.71□□□□□ -1.18
SMG6-211ENST00000572369 ADRA1AP35348 466 aa7.71□□□□□ -1.18
SMG6-211ENST00000572369 KCNJ1P48048 391 aa7.71□□□□□ -1.18
SMG6-211ENST00000572369 PPM1FP49593 454 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms