RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 METTL6Q8TCB7 284 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 URGCPQ8TCY9 931 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 SNX19Q92543 992 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 SH3KBP1Q96B97 665 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 MCRS1Q96EZ8 462 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 TMEM176AQ96HP8 235 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 VCPIP1Q96JH7 1222 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 FEM1CQ96JP0 617 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 OSBPL9Q96SU4 736 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 C17orf80Q9BSJ5 609 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 PI4K2AQ9BTU6 479 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 ITPAQ9BY32 194 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 MIS12Q9H081 205 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 TRPV6Q9H1D0 765 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 ISCUQ9H1K1 167 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 KCNK12Q9HB15 430 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 SEPT11Q9NVA2 429 aaKnown RBP7.25□□□□□ -1.25
CNOT1-222ENST00000570139 BEX4Q9NWD9 120 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-222ENST00000570139 VSX1Q9NZR4 365 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-222ENST00000570139 UVRAGQ9P2Y5 699 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 NAALADL1Q9UQQ1 740 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-222ENST00000570139 ENTPD2Q9Y5L3 495 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 LYVE1Q9Y5Y7 322 aa7.25□□□□□ -1.25
CNOT1-222ENST00000570139 PRAMEF33A0A0G2JMD5 474 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 hCG_1807616A0A1W2PRN6 198 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 A0A1W2PS29 197 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 GAGE10A6NGK3 116 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 KPNA7A9QM74 516 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 DIRC3C9JPN6 131 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 PRAMEF10O60809 474 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 HUS1O60921 280 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 HEXIM1O94992 359 aaKnown RBP7.24□□□□□ -1.25
CNOT1-222ENST00000570139 GPANK1O95872 356 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 CXCL10P02778 98 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 TMEM225BP0DP42 221 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 NSFP46459 744 aaKnown RBP7.24□□□□□ -1.25
CNOT1-222ENST00000570139 FAM189BP81408 668 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 MC1RQ01726 317 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 CREB5Q02930 508 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 PTP4A2Q12974 167 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 SEMA3BQ13214 749 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 TUBB3Q13509 450 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 DYRK1AQ13627 763 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 AAK1Q2M2I8 961 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 FAM102AQ5T9C2 384 aaPredicted RBP7.24□□□□□ -1.25
CNOT1-222ENST00000570139 DEPDC1Q5TB30 811 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 LIN9Q5TKA1 542 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 SPOPLQ6IQ16 392 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 GLB1LQ6UWU2 654 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 MICALCLQ6ZW33 695 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 SLC47A2Q86VL8 602 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 ECHDC2Q86YB7 292 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 SYT12Q8IV01 421 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 CCDC105Q8IYK2 499 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 IZUMO1Q8IYV9 350 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 TMEM86AQ8N2M4 240 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 TMEM35BQ8NCS4 154 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 LNX1Q8TBB1 728 aaPredicted RBP7.24□□□□□ -1.25
CNOT1-222ENST00000570139 ZMAT2Q96NC0 199 aaKnown RBP7.24□□□□□ -1.25
CNOT1-222ENST00000570139 LMF1Q96S06 567 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 CD180Q99467 661 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 NAPGQ99747 312 aaPredicted RBP7.24□□□□□ -1.25
CNOT1-222ENST00000570139 ADAM2Q99965 735 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 APOL6Q9BWW8 343 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 PHF7Q9BWX1 381 aaPredicted RBP7.24□□□□□ -1.25
CNOT1-222ENST00000570139 MRPL9Q9BYD2 267 aaKnown RBP7.24□□□□□ -1.25
CNOT1-222ENST00000570139 SLC25A18Q9H1K4 315 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 LHX5Q9H2C1 402 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 MUC13Q9H3R2 512 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 HIPK3Q9H422 1215 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 C11orf49Q9H6J7 331 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 NRDE2Q9H7Z3 1164 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 IL21RQ9HBE5 538 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 MRPL47Q9HD33 250 aaKnown RBP7.24□□□□□ -1.25
CNOT1-222ENST00000570139 TMEM161AQ9NX61 479 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 ALKBH4Q9NXW9 302 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 SERTAD3Q9UJW9 196 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 GTF3C4Q9UKN8 822 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 BARX2Q9UMQ3 279 aaPredicted RBP7.24□□□□□ -1.25
CNOT1-222ENST00000570139 GUCA1BQ9UMX6 200 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 DRG1Q9Y295 367 aaKnown RBP7.24□□□□□ -1.25
CNOT1-222ENST00000570139 SSX2IPQ9Y2D8 614 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 JRKLQ9Y4A0 524 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 HES2Q9Y543 173 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 PSAT1Q9Y617 370 aa7.24□□□□□ -1.25
CNOT1-222ENST00000570139 TDRD15B5MCY1 1934 aaKnown RBP7.24□□□□□ -1.25
CNOT1-222ENST00000570139 TBC1D3DA0A087WVF3 549 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 TBC1D3IA0A087WXS9 549 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 TBC1D3EA0A087X179 549 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 TBC1D3KA0A087X1G2 549 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 TBC1D3BA6NDS4 549 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 TBC1D3FA6NER0 549 aaPredicted RBP7.23□□□□□ -1.25
CNOT1-222ENST00000570139 ARL5CA6NH57 179 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 TBC1D3LB9A6J9 549 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 CES2O00748 559 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 PTGESO14684 152 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 MTA2O94776 668 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 CALB1P05937 261 aa7.23□□□□□ -1.25
CNOT1-222ENST00000570139 TBC1D3HP0C7X1 549 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms