RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 A0A0U1RQF3 1178 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 ADAMDEC1O15204 470 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 PRPF4O43172 522 aaKnown RBP eCLIP3.78□□□□□ -1.8
UBR1-211ENST00000569971 STX6O43752 255 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 RGS11O94810 467 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 TFPIP10646 304 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 TMEM11P17152 192 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 AGAP20933 346 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 GPR12P47775 334 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 ZBED6P86452 979 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 SORDQ00796 357 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 NHLH1Q02575 133 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 CFHR1Q03591 330 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 ITGADQ13349 1161 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 ARHGEF6Q15052 776 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 PLCB4Q15147 1175 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 NECTIN1Q15223 517 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 SHBQ15464 509 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 TCTN1Q2MV58 587 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 RABL6Q3YEC7 729 aaPredicted RBP3.78□□□□□ -1.8
UBR1-211ENST00000569971 MEX3CQ5U5Q3 659 aaKnown RBP3.78□□□□□ -1.8
UBR1-211ENST00000569971 PMS2CLQ68D20 193 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 ADALQ6DHV7 355 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 MIS18BP1Q6P0N0 1132 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 ZNF782Q6ZMW2 699 aaPredicted RBP3.78□□□□□ -1.8
UBR1-211ENST00000569971 CFAP77Q6ZQR2 320 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 QSOX2Q6ZRP7 698 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 UBE2Q1Q7Z7E8 422 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 KBTBD6Q86V97 674 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 FAM185AQ8N0U4 392 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 SYT2Q8N9I0 419 aaPredicted RBP3.78□□□□□ -1.8
UBR1-211ENST00000569971 OR14L1PQ8NHC6 308 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 HUS1BQ8NHY5 278 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 CEP76Q8TAP6 659 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 GPT2Q8TD30 523 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 PRPF31Q8WWY3 499 aaKnown RBP3.78□□□□□ -1.8
UBR1-211ENST00000569971 SH2D3AQ9BRG2 576 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 TEX13AQ9BXU3 409 aaPredicted RBP3.78□□□□□ -1.8
UBR1-211ENST00000569971 ALDH8A1Q9H2A2 487 aaPredicted RBP3.78□□□□□ -1.8
UBR1-211ENST00000569971 BOLA2Q9H3K6 86 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 TSPY26PQ9H489 355 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 PNRC2Q9NPJ4 139 aaKnown RBP3.78□□□□□ -1.8
UBR1-211ENST00000569971 GPR108Q9NPR9 543 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 PAPOLBQ9NRJ5 636 aaKnown RBP3.78□□□□□ -1.8
UBR1-211ENST00000569971 CWC25Q9NXE8 425 aaPredicted RBP3.78□□□□□ -1.8
UBR1-211ENST00000569971 ARHGEF38Q9NXL2 777 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 TAB2Q9NYJ8 693 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 CPSF2Q9P2I0 782 aaKnown RBP3.78□□□□□ -1.8
UBR1-211ENST00000569971 KLHL13Q9P2N7 655 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 SEC63Q9UGP8 760 aaKnown RBP3.78□□□□□ -1.8
UBR1-211ENST00000569971 USP16Q9Y5T5 823 aa3.78□□□□□ -1.8
UBR1-211ENST00000569971 AFDNP55196 1824 aaKnown RBP3.78□□□□□ -1.8
UBR1-211ENST00000569971 RPAP1Q9BWH6 1393 aaPredicted RBP3.77□□□□□ -1.81
UBR1-211ENST00000569971 STRCP1A6NGW2 1772 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 A0A0D9SFI3 127 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 hCG_1809904A0A1W2PP81 198 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 A0A1W2PPE2 198 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 A0A1W2PR64 198 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 SYCE3A1L190 88 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 PROB1E7EW31 1015 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 F8W810 466 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 PAPSS1O43252 624 aaPredicted RBP3.77□□□□□ -1.81
UBR1-211ENST00000569971 HSPA4LO95757 839 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 SRPRAP08240 638 aaKnown RBP3.77□□□□□ -1.81
UBR1-211ENST00000569971 SYT1P21579 422 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 MSNP26038 577 aaKnown RBP3.77□□□□□ -1.81
UBR1-211ENST00000569971 PON1P27169 355 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 GJB2P29033 226 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 HOXA13P31271 388 aaPredicted RBP3.77□□□□□ -1.81
UBR1-211ENST00000569971 IL15P40933 162 aaPredicted RBP3.77□□□□□ -1.81
UBR1-211ENST00000569971 LMAN1P49257 510 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 STAT2P52630 851 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 UBE2HP62256 183 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 MRPS5P82675 430 aaKnown RBP3.77□□□□□ -1.81
UBR1-211ENST00000569971 TFCP2Q12800 502 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 NAE1Q13564 534 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 LPIN1Q14693 890 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 KYNUQ16719 465 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 C2orf68Q2NKX9 166 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 SMTNL2Q2TAL5 461 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 USP41Q3LFD5 358 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 MCMDC2Q4G0Z9 681 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 CDONQ4KMG0 1287 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 IGSF11Q5DX21 431 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 PIK3CD-AS1Q5SR53 167 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 LRIF1Q5T3J3 769 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 CCDC183Q5T5S1 534 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 TMEM71Q6P5X7 295 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 KIF6Q6ZMV9 814 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 ZNF66Q6ZN08 573 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 FAM47EQ6ZV65 393 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 ADGRA1Q86SQ6 560 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 VSIG1Q86XK7 387 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 GPSM1Q86YR5 675 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 DENND6AQ8IWF6 608 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 CCDC83Q8IWF9 413 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 FAM217AQ8IXS0 508 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 SLC35F3Q8IY50 421 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 PARP16Q8N5Y8 322 aa3.77□□□□□ -1.81
UBR1-211ENST00000569971 ZBTB2Q8N680 514 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms