RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 SEC13P55735 322 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 AGAP9Q5VTM2 703 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 MMAAQ8IVH4 418 aaKnown RBP10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 NXPE1Q8N323 547 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 C19orf43Q9BQ61 176 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 MRPL57Q9BQC6 102 aaKnown RBP10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 GATA5Q9BWX5 397 aaPredicted RBP10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 SARS2Q9NP81 518 aaKnown RBP10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 PRSS16Q9NQE7 514 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 VPS9D1Q9Y2B5 631 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 ARL2BPQ9Y2Y0 163 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 C2CD4DB7Z1M9 353 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 IL1BP01584 269 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 PRNPP04156 253 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 APODP05090 189 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 CYP2A6P11509 494 aaPredicted RBP10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 ITGB6P18564 788 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 POU3F3P20264 500 aaPredicted RBP10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 XPAP23025 273 aaPredicted RBP10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 DPPA4Q7L190 304 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 ISCA2Q86U28 154 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 ANKS4BQ8N8V4 417 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 CD200R1Q8TD46 325 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 UCMAQ8WVF2 138 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 LRCH3Q96II8 777 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 NECTIN4Q96NY8 510 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 WRAP53Q9BUR4 548 aaKnown RBP10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 KLHL14Q9P2G3 628 aa10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 MBD1Q9UIS9 605 aaPredicted RBP10.85□□□□□ -0.67
PDXDC1-216ENST00000569715 PRMT5O14744 637 aaPredicted RBP10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 TRIM13O60858 407 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 GM2AP17900 193 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 OR4D1Q15615 310 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 CERS6Q6ZMG9 384 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 RDH11Q8TC12 318 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 KCNK13Q9HB14 408 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 POPDC3Q9HBV1 291 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 CYP4F12Q9HCS2 524 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 THAP1Q9NVV9 213 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 TSR3Q9UJK0 312 aaKnown RBP10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 MYO10Q9HD67 2058 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 A0A0G2JND7 137 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 AGAP14A8MT82 685 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 ESR1P03372 595 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 ZNF30P17039 623 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 ITGB7P26010 798 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 ADARP55265 1226 aaKnown RBP10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 B4GALNT1Q00973 533 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 PFKPQ01813 784 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 CCDC85BQ15834 202 aaPredicted RBP10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 IER5LQ5T953 404 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 EXT2Q93063 718 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 PLEKHG4BQ96PX9 1271 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 COQ6Q9Y2Z9 468 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 STON1Q9Y6Q2 735 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 K7EQS6 105 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 PFDN6O15212 129 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 VPS26AO75436 327 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 TSPAN12O95859 305 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 TROVE2P10155 538 aaKnown RBP eCLIP10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 CHRM3P20309 590 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 PSMD8P48556 350 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 CLCN7P51798 805 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 ACAP2Q15057 778 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 LIPMQ5VYY2 423 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 KLC3Q6P597 504 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 CPNE9Q8IYJ1 553 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 RBFAQ8N0V3 343 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 TMIEQ8NEW7 156 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 KCNJ9Q92806 393 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 SPATA16Q9BXB7 569 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 TRIM55Q9BYV6 548 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 CLPBQ9H078 707 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 PKD2L2Q9NZM6 624 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 DNAJC16Q9Y2G8 782 aa10.84□□□□□ -0.67
PDXDC1-216ENST00000569715 E5RI56 91 aa10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 CHRNGP07510 517 aa10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 SLC26A3P40879 764 aa10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 NAGLUP54802 743 aa10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 ABCE1P61221 599 aaKnown RBP10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 GPR33Q49SQ1 333 aa10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 HSF5Q4G112 596 aaPredicted RBP10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 LIPIQ6XZB0 460 aa10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 RPS27LQ71UM5 84 aaKnown RBP10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 CHPFQ8IZ52 775 aa10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 ZNF513Q8N8E2 541 aaPredicted RBP10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 P2RY13Q9BPV8 354 aa10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 TRMT6Q9UJA5 497 aaKnown RBP10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 MID2Q9UJV3 735 aa10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 A8MT66 165 aa10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 MTX2O75431 263 aa10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 ELFN1P0C7U0 828 aa10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 ZNF7P17097 686 aaPredicted RBP10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 TIE1P35590 1138 aa10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 KPNA2P52292 529 aaKnown RBP10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 HCAR2Q8TDS4 363 aa10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 CSGALNACT1Q8TDX6 532 aa10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 RIOK2Q9BVS4 552 aaKnown RBP10.83□□□□□ -0.68
PDXDC1-216ENST00000569715 PNPOQ9NVS9 261 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms