RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	TDRP	Q86YL5	185 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	BEST3	Q8N1M1	668 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	RDM1	Q8NG50	284 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	OR52I2	Q8NH67	350 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	NFKBID	Q8NI38	313 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	HTRA1	Q92743	480 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	ORAI1	Q96D31	301 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	LINGO1	Q96FE5	620 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	LINC00479	Q96M42	142 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	KLHL15	Q96M94	604 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	OPRPN	Q99935	248 aa	Predicted RBP	3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	HEMGN	Q9BXL5	484 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	WASH6P	Q9NQA3	447 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	SLC7A10	Q9NS82	523 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	TCP11L1	Q9NUJ3	509 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	PDP2	Q9P2J9	529 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	3.12	□□□□□ -1.91
UBR1-209	ENST00000569243	SARDH	Q9UL12	918 aa		3.12	□□□□□ -1.91
UBR1-209	ENST00000569243		A0A1W2PPI3	338 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	TCERG1	O14776	1098 aa	Known RBP	3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	KCNN4	O15554	427 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	ARHGEF9	O43307	516 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	F9	P00740	461 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	ZNF26	P17031	533 aa	Predicted RBP	3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	UGT1A1	P22309	533 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	UBA7	P41226	1012 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	AMPH	P49418	695 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	EIF3B	P55884	814 aa	Known RBP	3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	TAS2R38	P59533	333 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	LMO4	P61968	165 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	PLIN5	Q00G26	463 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	DHX8	Q14562	1220 aa	Known RBP	3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	KIR2DS3	Q14952	304 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	GSTA3	Q16772	222 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	SLC9B1	Q4ZJI4	515 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	DCST1	Q5T197	706 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	C18orf63	Q68DL7	685 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	FAM53A	Q6NSI3	398 aa	Predicted RBP	3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	C15orf39	Q6ZRI6	1047 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	RHBDF1	Q96CC6	855 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	SAAL1	Q96ER3	474 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	UBXN6	Q9BZV1	441 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	TKTL2	Q9H0I9	626 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	RANBP17	Q9H2T7	1088 aa	Known RBP	3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	PRKRIP1	Q9H875	184 aa	Predicted RBP	3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	VEZT	Q9HBM0	779 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	ZBTB20	Q9HC78	741 aa	Predicted RBP	3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	ASAH2	Q9NR71	780 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	ACSS1	Q9NUB1	689 aa	Predicted RBP	3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	ADPRHL2	Q9NX46	363 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	FBXL2	Q9UKC9	423 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	AAR2	Q9Y312	384 aa	Known RBP	3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	KDM3A	Q9Y4C1	1321 aa		3.11	□□□□□ -1.91
UBR1-209	ENST00000569243	LRRC53	A6NM62	1247 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	ANKRD66	B4E2M5	251 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	EIF3D	O15371	548 aa	Known RBP eCLIP	3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	BUD23	O43709	281 aa	Known RBP	3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	EIF3J	O75822	258 aa	Known RBP	3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	EGF	P01133	1207 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	ELF1	P32519	619 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	GGT5	P36269	586 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	GNAQ	P50148	359 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	RUNX1T1	Q06455	604 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	OLIG2	Q13516	323 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	TDG	Q13569	410 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	ZRSR2	Q15696	482 aa	Known RBP	3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	TMEM95	Q3KNT9	176 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	TCTE1	Q5JU00	501 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	ZNF280D	Q6N043	979 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	METTL7B	Q6UX53	244 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	RBMS3	Q6XE24	437 aa	Known RBP	3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	CPXCR1	Q8N123	301 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	PABPC5	Q96DU9	382 aa	Known RBP	3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	RNF125	Q96EQ8	232 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	GRAMD2B	Q96HH9	432 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	NR1H4	Q96RI1	486 aa	Predicted RBP	3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	PCYT2	Q99447	389 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	EGFL8	Q99944	293 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	EIF2AK1	Q9BQI3	630 aa	Known RBP	3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	DCTN5	Q9BTE1	182 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	SLC52A3	Q9NQ40	469 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	RRN3	Q9NYV6	651 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	UBA2	Q9UBT2	640 aa	Predicted RBP	3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	PGAP2	Q9UHJ9	254 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	CYP46A1	Q9Y6A2	500 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243	DISP3	Q9P2K9	1392 aa		3.1	□□□□□ -1.91
UBR1-209	ENST00000569243		A0A1W2PRG0	241 aa		3.09	□□□□□ -1.91
UBR1-209	ENST00000569243	NDUFAF8	A1L188	74 aa		3.09	□□□□□ -1.91
UBR1-209	ENST00000569243	RRN3P2	A6NIE6	340 aa		3.09	□□□□□ -1.91
UBR1-209	ENST00000569243	FAM90A26	D6RGX4	464 aa		3.09	□□□□□ -1.91
UBR1-209	ENST00000569243		H0YIN7	160 aa		3.09	□□□□□ -1.91
UBR1-209	ENST00000569243	HS3ST1	O14792	307 aa		3.09	□□□□□ -1.91
UBR1-209	ENST00000569243	POLB	P06746	335 aa		3.09	□□□□□ -1.91
UBR1-209	ENST00000569243	XBP1	P17861	261 aa		3.09	□□□□□ -1.91
UBR1-209	ENST00000569243	ZNF10	P21506	573 aa	Predicted RBP	3.09	□□□□□ -1.91
UBR1-209	ENST00000569243	CNTF	P26441	200 aa		3.09	□□□□□ -1.91
UBR1-209	ENST00000569243	HOXA13	P31271	388 aa	Predicted RBP	3.09	□□□□□ -1.91
UBR1-209	ENST00000569243	APOBEC1	P41238	236 aa	Known RBP	3.09	□□□□□ -1.91
UBR1-209	ENST00000569243	PAFAH1B1	P43034	410 aa		3.09	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms