RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 KRT39Q6A163 491 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 PMF1Q6P1K2 205 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 SHC4Q6S5L8 630 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 CLEC18BQ6UXF7 455 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 LARP4Q71RC2 724 aaKnown RBP eCLIP5.72□□□□□ -1.49
CDH13-211ENST00000568770 INTS8Q75QN2 995 aaKnown RBP5.72□□□□□ -1.49
CDH13-211ENST00000568770 RAB11FIP2Q7L804 512 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 CXXC5Q7LFL8 322 aaKnown RBP5.72□□□□□ -1.49
CDH13-211ENST00000568770 VASH2Q86V25 355 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 CIR1Q86X95 450 aaPredicted RBP5.72□□□□□ -1.49
CDH13-211ENST00000568770 TMEM151BQ8IW70 566 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 GRAMD1CQ8IYS0 662 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 SCML4Q8N228 414 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 CBARPQ8N350 705 aaPredicted RBP5.72□□□□□ -1.49
CDH13-211ENST00000568770 TTC39CQ8N584 583 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 CLEC18CQ8NCF0 446 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 LINC00301Q8NCQ3 95 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 CALML6Q8TD86 181 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 LMX1AQ8TE12 382 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 IRGQQ8WZA9 623 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 MBD6Q96DN6 1003 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 AHCYL2Q96HN2 611 aaKnown RBP5.72□□□□□ -1.49
CDH13-211ENST00000568770 BMFQ96LC9 184 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 IL12RB2Q99665 862 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 CCDC3Q9BQI4 270 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 KRTAP9-2Q9BYQ4 174 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 MAGEF1Q9HAY2 307 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 EPB41L5Q9HCM4 733 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 TMEM8AQ9HCN3 771 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 SLC25A13Q9UJS0 675 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 ZFR2Q9UPR6 939 aaKnown RBP5.72□□□□□ -1.49
CDH13-211ENST00000568770 CSNK1G3Q9Y6M4 447 aa5.72□□□□□ -1.49
CDH13-211ENST00000568770 DOPEY1Q5JWR5 2465 aa5.71□□□□□ -1.49
CDH13-211ENST00000568770 PRAMEF33A0A0G2JMD5 474 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 RNF103O00237 685 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 O00370 1275 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 NTN3O00634 580 aaPredicted RBP5.71□□□□□ -1.5
CDH13-211ENST00000568770 TPP1O14773 563 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 RAD51BO15315 384 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 CALUO43852 315 aaPredicted RBP5.71□□□□□ -1.5
CDH13-211ENST00000568770 PRAMEF10O60809 474 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 CUTAO60888 179 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 GCATO75600 419 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 CYP7B1O75881 506 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 PAK4O96013 591 aaPredicted RBP5.71□□□□□ -1.5
CDH13-211ENST00000568770 FYNP06241 537 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 CELA3BP08861 270 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 SETSIPP0DME0 302 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 ZSCAN22P10073 491 aaPredicted RBP5.71□□□□□ -1.5
CDH13-211ENST00000568770 LIPCP11150 499 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 KRT13P13646 458 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 CD19P15391 556 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 WT1P19544 449 aaPredicted RBP5.71□□□□□ -1.5
CDH13-211ENST00000568770 SYT1P21579 422 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 NR2F2P24468 414 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 GPR3P46089 330 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 RABIFP47224 123 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 EIF3IQ13347 325 aaKnown RBP5.71□□□□□ -1.5
CDH13-211ENST00000568770 TOP3AQ13472 1001 aaPredicted RBP5.71□□□□□ -1.5
CDH13-211ENST00000568770 PDE1CQ14123 709 aaPredicted RBP5.71□□□□□ -1.5
CDH13-211ENST00000568770 FGL2Q14314 439 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 TPRG1LQ5T0D9 272 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 HIST2H2BCQ6DN03 193 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 CXorf57Q6NSI4 855 aaKnown RBP5.71□□□□□ -1.5
CDH13-211ENST00000568770 TIGD7Q6NT04 549 aaPredicted RBP5.71□□□□□ -1.5
CDH13-211ENST00000568770 KYAT3Q6YP21 454 aaKnown RBP5.71□□□□□ -1.5
CDH13-211ENST00000568770 ESPNLQ6ZVH7 1005 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 PARGQ86W56 976 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 CHSY1Q86X52 802 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 SLC35F3Q8IY50 421 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 FAM186BQ8IYM0 893 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 CCAR2Q8N163 923 aaKnown RBP5.71□□□□□ -1.5
CDH13-211ENST00000568770 FBXO39Q8N4B4 442 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 FBXL13Q8NEE6 735 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 OR52K2Q8NGK3 314 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 WDR48Q8TAF3 677 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 ZNF564Q8TBZ8 553 aaPredicted RBP5.71□□□□□ -1.5
CDH13-211ENST00000568770 DQX1Q8TE96 717 aaKnown RBP5.71□□□□□ -1.5
CDH13-211ENST00000568770 HTR3CQ8WXA8 447 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 NAT6Q93015 286 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 EEF2KMTQ96G04 330 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 SLC39A13Q96H72 371 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 FAXDC2Q96IV6 333 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 PPP1R13BQ96KQ4 1090 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 SERPINB11Q96P15 392 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 KRTAP4-12Q9BQ66 201 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 FEM1AQ9BSK4 669 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 FUCA2Q9BTY2 467 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 SLC17A9Q9BYT1 436 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 MIS12Q9H081 205 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 TMEM168Q9H0V1 697 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 TCEAL2Q9H3H9 227 aaPredicted RBP5.71□□□□□ -1.5
CDH13-211ENST00000568770 EXOC1Q9NV70 894 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 GEMIN8Q9NWZ8 242 aaKnown RBP5.71□□□□□ -1.5
CDH13-211ENST00000568770 RAB20Q9NX57 234 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 SEPT10Q9P0V9 454 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 PISDQ9UG56 409 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 IPO11Q9UI26 975 aaKnown RBP5.71□□□□□ -1.5
CDH13-211ENST00000568770 EDARQ9UNE0 448 aa5.71□□□□□ -1.5
CDH13-211ENST00000568770 NAALADL1Q9UQQ1 740 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms