RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 TIGD7Q6NT04 549 aaPredicted RBP15.35■□□□□ 0.05
NME3-211ENST00000568561 CRTC3Q6UUV7 619 aa15.35■□□□□ 0.05
NME3-211ENST00000568561 CEACAM20Q6UY09 585 aa15.35■□□□□ 0.05
NME3-211ENST00000568561 LYSMD3Q7Z3D4 306 aa15.35■□□□□ 0.05
NME3-211ENST00000568561 LRRC49Q8IUZ0 686 aa15.35■□□□□ 0.05
NME3-211ENST00000568561 BPIFA3Q9BQP9 254 aa15.35■□□□□ 0.05
NME3-211ENST00000568561 OR2AG1Q9H205 316 aa15.35■□□□□ 0.05
NME3-211ENST00000568561 OSGEPL1Q9H4B0 414 aa15.35■□□□□ 0.05
NME3-211ENST00000568561 FAM83DQ9H4H8 585 aa15.35■□□□□ 0.05
NME3-211ENST00000568561 DTLQ9NZJ0 730 aa15.35■□□□□ 0.05
NME3-211ENST00000568561 ATXN10Q9UBB4 475 aa15.35■□□□□ 0.05
NME3-211ENST00000568561 USP9YO00507 2555 aaPredicted RBP15.35■□□□□ 0.05
NME3-211ENST00000568561 SMTNL1A8MU46 457 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 GOLGA6L22H0YM25 854 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 KCNK1O00180 336 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 GRID2O43424 1007 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 MBD3O95983 291 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 SERPINC1P01008 464 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 MMP2P08253 660 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 PIRTP0C851 137 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 ZNF8P17098 575 aaPredicted RBP15.34■□□□□ 0.05
NME3-211ENST00000568561 CA4P22748 312 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 TAS2R40P59535 323 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 SRSF1Q07955 248 aaKnown RBP eCLIP15.34■□□□□ 0.05
NME3-211ENST00000568561 NFKBIBQ15653 356 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 C16orf46Q6P387 395 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 SLC9B2Q86UD5 537 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 PQLC3Q8N755 202 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 C9orf43Q8TAL5 461 aaPredicted RBP15.34■□□□□ 0.05
NME3-211ENST00000568561 CPLX3Q8WVH0 158 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 STARD8Q92502 1023 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 CATSPER2Q96P56 530 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 LYSMD1Q96S90 227 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 HERPUD2Q9BSE4 406 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 CEP41Q9BYV8 373 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 PKD2L2Q9NZM6 624 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 SCHIP1Q9P0W5 487 aaPredicted RBP15.34■□□□□ 0.05
NME3-211ENST00000568561 CPNE7Q9UBL6 633 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 DNPEPQ9ULA0 475 aa15.34■□□□□ 0.05
NME3-211ENST00000568561 MYO1FO00160 1098 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 POLR1CO15160 346 aaPredicted RBP15.33■□□□□ 0.04
NME3-211ENST00000568561 CAPN5O15484 640 aaPredicted RBP15.33■□□□□ 0.04
NME3-211ENST00000568561 NUAK1O60285 661 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 DLGAP3O95886 979 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 JCHAINP01591 159 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 ZNF28P17035 718 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 TYRP1P17643 537 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 F8A1P23610 371 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 CCNCP24863 283 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 MAP4P27816 1152 aaKnown RBP15.33■□□□□ 0.04
NME3-211ENST00000568561 EPHA4P54764 986 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 RPL26P61254 145 aaKnown RBP15.33■□□□□ 0.04
NME3-211ENST00000568561 FOXM1Q08050 763 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 SLC10A2Q12908 348 aaPredicted RBP15.33■□□□□ 0.04
NME3-211ENST00000568561 ZBTB17Q13105 803 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 NR1I3Q14994 352 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 SEPT7Q16181 437 aaKnown RBP15.33■□□□□ 0.04
NME3-211ENST00000568561 HADHQ16836 314 aaKnown RBP15.33■□□□□ 0.04
NME3-211ENST00000568561 PHYKPLQ8IUZ5 450 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 KCTD6Q8NC69 237 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 CCNYQ8ND76 341 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 SH3KBP1Q96B97 665 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 EID2BQ96D98 161 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 TSGA13Q96PP4 275 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 PLEKHG4BQ96PX9 1271 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 ZNF670Q9BS34 389 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 FBXO8Q9NRD0 319 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 KLC4Q9NSK0 619 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 SIDT1Q9NXL6 827 aaKnown RBP15.33■□□□□ 0.04
NME3-211ENST00000568561 OGFRQ9NZT2 677 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 TUBD1Q9UJT1 453 aa15.33■□□□□ 0.04
NME3-211ENST00000568561 RPL26L1Q9UNX3 145 aaKnown RBP15.33■□□□□ 0.04
NME3-211ENST00000568561 TMEM184BQ9Y519 407 aaPredicted RBP15.33■□□□□ 0.04
NME3-211ENST00000568561 MN1Q10571 1320 aaPredicted RBP15.33■□□□□ 0.04
NME3-211ENST00000568561 KIR2DS5A0A0G2JLQ3 304 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 A0A0G2JNG1 304 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 KIR2DS3K7RE56 304 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 MTX2O75431 263 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 SERPING1P05155 500 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 SLC2A4P14672 509 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 NR1D1P20393 614 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 CES1P23141 567 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 MAN1A1P33908 653 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 CASRP41180 1078 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 STAT5AP42229 794 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 SEPHS1P49903 392 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 UBE2IP63279 158 aaKnown RBP15.32■□□□□ 0.04
NME3-211ENST00000568561 ABHD18Q0P651 414 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 KIR2DS5Q14953 304 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 FIGNQ5HY92 759 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 ZNF569Q5MCW4 686 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 CCDC13Q8IYE1 715 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 CCHCR1Q8TD31 782 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 ABHD17AQ96GS6 310 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 ELMO2Q96JJ3 720 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 TGM7Q96PF1 710 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 ZPBPQ9BS86 351 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 MLPHQ9BV36 600 aaPredicted RBP15.32■□□□□ 0.04
NME3-211ENST00000568561 SPATA16Q9BXB7 569 aa15.32■□□□□ 0.04
NME3-211ENST00000568561 CARD9Q9H257 536 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms