RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 CCDC126Q96EE4 140 aa8.91□□□□□ -0.98
HDGFL3-206ENST00000568294 LINGO1Q96FE5 620 aa8.91□□□□□ -0.98
HDGFL3-206ENST00000568294 AURKBQ96GD4 344 aaPredicted RBP8.91□□□□□ -0.98
HDGFL3-206ENST00000568294 MAELQ96JY0 434 aaKnown RBP8.91□□□□□ -0.98
HDGFL3-206ENST00000568294 MUS81Q96NY9 551 aa8.91□□□□□ -0.98
HDGFL3-206ENST00000568294 MYOCQ99972 504 aa8.91□□□□□ -0.98
HDGFL3-206ENST00000568294 PRKD2Q9BZL6 878 aa8.91□□□□□ -0.98
HDGFL3-206ENST00000568294 TM6SF2Q9BZW4 377 aa8.91□□□□□ -0.98
HDGFL3-206ENST00000568294 ZYG11BQ9C0D3 744 aa8.91□□□□□ -0.98
HDGFL3-206ENST00000568294 GID8Q9NWU2 228 aa8.91□□□□□ -0.98
HDGFL3-206ENST00000568294 LIMD1Q9UGP4 676 aa8.91□□□□□ -0.98
HDGFL3-206ENST00000568294 FKBPLQ9UIM3 349 aa8.91□□□□□ -0.98
HDGFL3-206ENST00000568294 ANAPC2Q9UJX6 822 aa8.91□□□□□ -0.98
HDGFL3-206ENST00000568294 SPO11Q9Y5K1 396 aa8.91□□□□□ -0.98
HDGFL3-206ENST00000568294 KRT87PA6NCN2 255 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 H0Y626 953 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 GMNNO75496 209 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 TRIM16O95361 564 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 CHEK2O96017 543 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 CHRNA1P02708 482 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 ZNF37AP17032 561 aaPredicted RBP8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 RGRP47804 291 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 CPT1AP50416 773 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 HK2P52789 917 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 HMGCS1Q01581 520 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 FPGSQ05932 587 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 TAF10Q12962 218 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 NHSL2Q5HYW2 709 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 ARMC12Q5T9G4 340 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 ANKS6Q68DC2 871 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 SPESP1Q6UW49 350 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 SYVN1Q86TM6 617 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 FAM126BQ8IXS8 530 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 PHACTR4Q8IZ21 702 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 TMEM86AQ8N2M4 240 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 FAM86B1Q8N7N1 296 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 METTL6Q8TCB7 284 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 SDCCAG3Q96C92 435 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 ZBED2Q9BTP6 218 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 MRPL40Q9NQ50 206 aaKnown RBP8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 TRMT13Q9NUP7 481 aaKnown RBP8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 MARCH2Q9P0N8 246 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 PSME4Q14997 1843 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 TCRBV3S1A0A5B6 114 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 TNPO2O14787 897 aaKnown RBP8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 DIRAS1O95057 198 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 LRATO95237 230 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 HSPA1AP0DMV8 641 aaKnown RBP8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 HSPA1BP0DMV9 641 aaKnown RBP8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 MAGP20916 626 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 UGT1A1P22309 533 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 UGT1A4P22310 534 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 VARSP26640 1264 aaKnown RBP8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 UGT1A3P35503 534 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 UGT1A5P35504 534 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 RPS9P46781 194 aaKnown RBP8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 HCAR3P49019 387 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 RPL38P63173 70 aaKnown RBP8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 TRIM32Q13049 653 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 PTGR1Q14914 329 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 RAB41Q5JT25 222 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 GLYATQ6IB77 296 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 GRAMD4Q6IC98 578 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 GALNT18Q6P9A2 607 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 PIWIL3Q7Z3Z3 882 aaKnown RBP8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 PATL1Q86TB9 770 aaKnown RBP8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 TRIM74Q86UV6 250 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 TRIM73Q86UV7 250 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 EEF1AKMT1Q8WVE0 214 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 RSPH1Q8WYR4 309 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 NSMCE2Q96MF7 247 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 MCMBPQ9BTE3 642 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 SLC2A11Q9BYW1 496 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 RPF2Q9H7B2 306 aaKnown RBP8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 PKD2L2Q9NZM6 624 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 INVSQ9Y283 1065 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 ANGPTL3Q9Y5C1 460 aa8.9□□□□□ -0.98
HDGFL3-206ENST00000568294 MBLAC1A4D2B0 266 aaPredicted RBP8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 FXYD1O00168 92 aa8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 AP3B1O00203 1094 aa8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 FGF10O15520 208 aaPredicted RBP8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 B3GALT4O96024 378 aa8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 CYBBP04839 570 aa8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 SLC2A4P14672 509 aa8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 RPL17P18621 184 aaKnown RBP8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 LEPRP48357 1165 aaKnown RBP8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 GATMP50440 423 aa8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 CDK9P50750 372 aaKnown RBP8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 GRB14Q14449 540 aa8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 RFTN1Q14699 578 aaPredicted RBP8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 GTDC1Q4AE62 458 aa8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 FAM45BPQ6NSW5 357 aa8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 BNIPLQ7Z465 357 aa8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 ITIH5Q86UX2 942 aa8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 ADGRG5Q8IZF4 528 aa8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 FAM45AQ8TCE6 357 aa8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 TFAP2CQ92754 450 aa8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 SERPINB11Q96P15 392 aa8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 FAM193BQ96PV7 902 aaPredicted RBP8.9□□□□□ -0.99
HDGFL3-206ENST00000568294 CD300AQ9UGN4 299 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms