RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 SRPRAP08240 638 aaKnown RBP7.01□□□□□ -1.29
SMG1-215ENST00000568239 PSMC3P17980 439 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 FCARP24071 287 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 ACTN3Q08043 901 aaPredicted RBP7.01□□□□□ -1.29
SMG1-215ENST00000568239 BNIP1Q12981 228 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 RCN2Q14257 317 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 PDGFRLQ15198 375 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 TSNQ15631 228 aaKnown RBP7.01□□□□□ -1.29
SMG1-215ENST00000568239 PFKFB4Q16877 469 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 LACTB2Q53H82 288 aaPredicted RBP7.01□□□□□ -1.29
SMG1-215ENST00000568239 PARM1Q6UWI2 310 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 CLNKQ7Z7G1 428 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 RBFAQ8N0V3 343 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 KIF2BQ8N4N8 673 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 CPA6Q8N4T0 437 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 EEF1AKMT1Q8WVE0 214 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 LINGO1Q96FE5 620 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 TMEM237Q96Q45 408 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 RPP25Q9BUL9 199 aaKnown RBP7.01□□□□□ -1.29
SMG1-215ENST00000568239 SPATA16Q9BXB7 569 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 NMUR2Q9GZQ4 415 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 DRC3Q9H069 523 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 PCDH12Q9NPG4 1184 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 PRDM4Q9UKN5 801 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 RNF112Q9ULX5 631 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 TRIM33Q9UPN9 1127 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 APOBEC2Q9Y235 224 aaKnown RBP7.01□□□□□ -1.29
SMG1-215ENST00000568239 SLC27A6Q9Y2P4 619 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 TCF20Q9UGU0 1960 aaKnown RBP7.01□□□□□ -1.29
SMG1-215ENST00000568239 GOLGA8QA0A0J9YX86 632 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 GOLGA8OA6NCC3 632 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 C16orf96A6NNT2 1141 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 SUPT3HB4E1H0 165 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 GOLGA8NF8WBI6 632 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 GAPDHSO14556 408 aaPredicted RBP7.01□□□□□ -1.29
SMG1-215ENST00000568239 SUPT3HO75486 399 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 SLC25A14O95258 325 aaPredicted RBP7.01□□□□□ -1.29
SMG1-215ENST00000568239 CYP2A6P11509 494 aaPredicted RBP7.01□□□□□ -1.29
SMG1-215ENST00000568239 IGFBP4P22692 258 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 PSMA3P25788 255 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 SLC26A3P40879 764 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 WASP42768 502 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 CDH13P55290 713 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 IL2P60568 153 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 PFKPQ01813 784 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 CCDC15Q0P6D6 951 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 ILF2Q12905 390 aaKnown RBP7.01□□□□□ -1.29
SMG1-215ENST00000568239 OR4D1Q15615 310 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 GALNTL6Q49A17 601 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 ATP13A5Q4VNC0 1218 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 ZNF805Q5CZA5 627 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 DET1Q7L5Y6 550 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 TERB1Q8NA31 727 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 STAG3L4Q8TBR4 150 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 KCNJ9Q92806 393 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 SCAMP4Q969E2 229 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 KLHL29Q96CT2 875 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 CCDC126Q96EE4 140 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 LYSMD1Q96S90 227 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 ZNF576Q9H609 170 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 COG4Q9H9E3 785 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 GNPTGQ9UJJ9 305 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 SLC12A4Q9UP95 1085 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 ITM2BQ9Y287 266 aa7.01□□□□□ -1.29
SMG1-215ENST00000568239 KIF26AQ9ULI4 1882 aaPredicted RBP7.01□□□□□ -1.29
SMG1-215ENST00000568239 A0A1W2PQ67 120 aa7□□□□□ -1.29
SMG1-215ENST00000568239 NPEPPSL1A6NEC2 478 aa7□□□□□ -1.29
SMG1-215ENST00000568239 UPK3BL1B0FP48 263 aa7□□□□□ -1.29
SMG1-215ENST00000568239 UPK3BL2E5RIL1 263 aa7□□□□□ -1.29
SMG1-215ENST00000568239 F8W8V4 182 aa7□□□□□ -1.29
SMG1-215ENST00000568239 CDC7O00311 574 aa7□□□□□ -1.29
SMG1-215ENST00000568239 FCHO1O14526 889 aa7□□□□□ -1.29
SMG1-215ENST00000568239 MTX2O75431 263 aa7□□□□□ -1.29
SMG1-215ENST00000568239 SIX3O95343 332 aaPredicted RBP7□□□□□ -1.29
SMG1-215ENST00000568239 C1SP09871 688 aa7□□□□□ -1.29
SMG1-215ENST00000568239 TPBGLP0DKB5 382 aa7□□□□□ -1.29
SMG1-215ENST00000568239 LAMP2P13473 410 aa7□□□□□ -1.29
SMG1-215ENST00000568239 NCF2P19878 526 aaPredicted RBP7□□□□□ -1.29
SMG1-215ENST00000568239 NFKBIAP25963 317 aa7□□□□□ -1.29
SMG1-215ENST00000568239 ACRV1P26436 265 aa7□□□□□ -1.29
SMG1-215ENST00000568239 AKT1P31749 480 aa7□□□□□ -1.29
SMG1-215ENST00000568239 GJA4P35212 333 aa7□□□□□ -1.29
SMG1-215ENST00000568239 ETV3P41162 512 aa7□□□□□ -1.29
SMG1-215ENST00000568239 SKIV2L2P42285 1042 aaKnown RBP7□□□□□ -1.29
SMG1-215ENST00000568239 SPINT3P49223 89 aa7□□□□□ -1.29
SMG1-215ENST00000568239 RPL14P50914 215 aaKnown RBP7□□□□□ -1.29
SMG1-215ENST00000568239 SUOXP51687 545 aa7□□□□□ -1.29
SMG1-215ENST00000568239 METAP1P53582 386 aa7□□□□□ -1.29
SMG1-215ENST00000568239 PRKAA2P54646 552 aa7□□□□□ -1.29
SMG1-215ENST00000568239 PRKAA1Q13131 559 aa7□□□□□ -1.29
SMG1-215ENST00000568239 ZNF234Q14588 700 aa7□□□□□ -1.29
SMG1-215ENST00000568239 GRIN2CQ14957 1233 aa7□□□□□ -1.29
SMG1-215ENST00000568239 PDCD2Q16342 344 aaPredicted RBP7□□□□□ -1.29
SMG1-215ENST00000568239 HSF5Q4G112 596 aaPredicted RBP7□□□□□ -1.29
SMG1-215ENST00000568239 SETMARQ53H47 684 aaPredicted RBP7□□□□□ -1.29
SMG1-215ENST00000568239 SH2D4BQ5SQS7 431 aa7□□□□□ -1.29
SMG1-215ENST00000568239 UGT3A1Q6NUS8 523 aa7□□□□□ -1.29
SMG1-215ENST00000568239 FBXL19Q6PCT2 694 aa7□□□□□ -1.29
SMG1-215ENST00000568239 Q6ZVL8 140 aa7□□□□□ -1.29
SMG1-215ENST00000568239 PIWIL4Q7Z3Z4 852 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms