RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 FEZ2Q9UHY8 353 aaPredicted RBP12.89□□□□□ -0.35
CNOT1-213ENST00000568158 FKBPLQ9UIM3 349 aa12.89□□□□□ -0.35
CNOT1-213ENST00000568158 GPR34Q9UPC5 381 aa12.89□□□□□ -0.35
CNOT1-213ENST00000568158 U3KQA8 63 aa12.89□□□□□ -0.35
CNOT1-213ENST00000568158 COL5A1P20908 1838 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-213ENST00000568158 MYLKQ15746 1914 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 GLYATL1P3A0A0U1RQE8 302 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 TCRBV7S3A2A0A539 114 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 CPED1A4D0V7 1026 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 CTAGE9A4FU28 777 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 ERI2A8K979 691 aaKnown RBP12.88□□□□□ -0.35
CNOT1-213ENST00000568158 HYAL3O43820 417 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-213ENST00000568158 DKK1O94907 266 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 APRTP07741 180 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 PMLP29590 882 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 ACADVLP49748 655 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 CLDN6P56747 220 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 BASP1P80723 227 aaKnown RBP12.88□□□□□ -0.35
CNOT1-213ENST00000568158 XIAPP98170 497 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 SEPT6Q14141 434 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 KHDC1Q4VXA5 237 aaKnown RBP12.88□□□□□ -0.35
CNOT1-213ENST00000568158 CCDC38Q502W7 563 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 C6orf132Q5T0Z8 1188 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 PDPK2PQ6A1A2 396 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 ZCCHC8Q6NZY4 707 aaKnown RBP12.88□□□□□ -0.35
CNOT1-213ENST00000568158 LVRNQ6Q4G3 990 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 DHRS13Q6UX07 377 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 C4orf22Q6V702 233 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 PPP1R21Q6ZMI0 780 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 CHST15Q7LFX5 561 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-213ENST00000568158 SLC35F3Q8IY50 421 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 SDR16C5Q8N3Y7 309 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 SCG3Q8WXD2 468 aaKnown RBP12.88□□□□□ -0.35
CNOT1-213ENST00000568158 ADAMTS14Q8WXS8 1223 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 BOCQ9BWV1 1114 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 FAM96AQ9H5X1 160 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 CASS4Q9NQ75 786 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 TRNAU1APQ9NX07 287 aaKnown RBP12.88□□□□□ -0.35
CNOT1-213ENST00000568158 SAR1BQ9Y6B6 198 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 ASXL3Q9C0F0 2248 aa12.88□□□□□ -0.35
CNOT1-213ENST00000568158 TRBV23OR9-2A0A075B6M9 112 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 NUAK1O60285 661 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 PHF2O75151 1096 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 PPFIA2O75334 1257 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 CKMT1AP12532 417 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 ACP1P24666 158 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 ZNF140P52738 457 aaPredicted RBP12.87□□□□□ -0.35
CNOT1-213ENST00000568158 CDH17Q12864 832 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 TMEM115Q12893 351 aaPredicted RBP12.87□□□□□ -0.35
CNOT1-213ENST00000568158 GPS1Q13098 491 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 PEX6Q13608 980 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 ZDHHC20Q5W0Z9 365 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 OGFOD3Q6PK18 319 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 SLC30A9Q6PML9 568 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 RAB44Q7Z6P3 723 aaPredicted RBP12.87□□□□□ -0.35
CNOT1-213ENST00000568158 MARCH9Q86YJ5 346 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 GALNT13Q8IUC8 556 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 GDAP1Q8TB36 358 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 DTX3LQ8TDB6 740 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 DNAJC1Q96KC8 554 aaKnown RBP12.87□□□□□ -0.35
CNOT1-213ENST00000568158 VPS35Q96QK1 796 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 OR2M4Q96R27 311 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 GSDMCQ9BYG8 508 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 DPEP2Q9H4A9 486 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 ASB8Q9H765 288 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 TAAR2Q9P1P5 351 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 VPS18Q9P253 973 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 PADI4Q9UM07 663 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 WASF3Q9UPY6 502 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 NEU2Q9Y3R4 380 aa12.87□□□□□ -0.35
CNOT1-213ENST00000568158 PLXNB3Q9ULL4 1909 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 CASC3O15234 703 aaKnown RBP12.86□□□□□ -0.35
CNOT1-213ENST00000568158 GRID2O43424 1007 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 RFPL3O75679 317 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 SRP72O76094 671 aaKnown RBP12.86□□□□□ -0.35
CNOT1-213ENST00000568158 CDK14O94921 469 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 CASQ1P31415 396 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 CDKN1CP49918 316 aaPredicted RBP12.86□□□□□ -0.35
CNOT1-213ENST00000568158 DUSP3P51452 185 aaPredicted RBP12.86□□□□□ -0.35
CNOT1-213ENST00000568158 PDE1BQ01064 536 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 ILF3Q12906 894 aaKnown RBP eCLIP12.86□□□□□ -0.357e-7■□□□□ 9.9
CNOT1-213ENST00000568158 NR0B2Q15466 257 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 PERM1Q5SV97 790 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 GUSBP11Q6P575 273 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 SYT10Q6XYQ8 523 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 EFL1Q7Z2Z2 1120 aaKnown RBP12.86□□□□□ -0.35
CNOT1-213ENST00000568158 PHYKPLQ8IUZ5 450 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 STYXQ8WUJ0 223 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 NAT14Q8WUY8 206 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 GLMNQ92990 594 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 CDKN2AIPNLQ96HQ2 116 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 SCNM1Q9BWG6 230 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 DDX47Q9H0S4 455 aaKnown RBP12.86□□□□□ -0.35
CNOT1-213ENST00000568158 RMI1Q9H9A7 625 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 NLE1Q9NVX2 485 aaPredicted RBP12.86□□□□□ -0.35
CNOT1-213ENST00000568158 SLC23A2Q9UGH3 650 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 APPL1Q9UKG1 709 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 KLK13Q9UKR3 277 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 PCDHGA1Q9Y5H4 931 aa12.86□□□□□ -0.35
CNOT1-213ENST00000568158 RP1P56715 2156 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms