RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SOWAHDA6NJG2 315 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 BTNL10A8MVZ5 291 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 FADS2P1A8MWK0 482 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 HACD1B0YJ81 288 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 HGSO14964 777 aaPredicted RBP4.74□□□□□ -1.65
CLK3-219ENST00000567805 PPM1DO15297 605 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 KLK10O43240 276 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 GRID2O43424 1007 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 B4GAT1O43505 415 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 DNAJC6O75061 913 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 PMPCBO75439 489 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 TNFSF15O95150 251 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 SLC25A14O95258 325 aaPredicted RBP4.74□□□□□ -1.65
CLK3-219ENST00000567805 EPOP01588 193 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 ATP1A1P05023 1023 aaKnown RBP4.74□□□□□ -1.65
CLK3-219ENST00000567805 PIRTP0C851 137 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 JMJD7P0C870 316 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 SLC2A4P14672 509 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 PECAM1P16284 738 aaPredicted RBP4.74□□□□□ -1.65
CLK3-219ENST00000567805 ALDH4A1P30038 563 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 CD68P34810 354 aaPredicted RBP4.74□□□□□ -1.65
CLK3-219ENST00000567805 CTNNA1P35221 906 aaKnown RBP4.74□□□□□ -1.65
CLK3-219ENST00000567805 UGT1A5P35504 534 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 MARCKSL1P49006 195 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 OR1D5P58170 312 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 GPLD1P80108 840 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 ADCY2Q08462 1091 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 WASHC5Q12768 1159 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 XRCC4Q13426 336 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 SQSTM1Q13501 440 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 LLGL1Q15334 1064 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 ZNF569Q5MCW4 686 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 BBS12Q6ZW61 710 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 B4GALNT4Q76KP1 1039 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 MARK2Q7KZI7 788 aaKnown RBP4.74□□□□□ -1.65
CLK3-219ENST00000567805 CHST15Q7LFX5 561 aaPredicted RBP4.74□□□□□ -1.65
CLK3-219ENST00000567805 GPR155Q7Z3F1 870 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 KDELC2Q7Z4H8 507 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 ZC3H18Q86VM9 953 aaKnown RBP4.74□□□□□ -1.65
CLK3-219ENST00000567805 PHYKPLQ8IUZ5 450 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 SLITRK4Q8IW52 837 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 NAGSQ8N159 534 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 SFRP1Q8N474 314 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 TRAM1L1Q8N609 369 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 AVL9Q8NBF6 648 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 TTC13Q8NBP0 860 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 PATE1Q8WXA2 126 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 HTR3CQ8WXA8 447 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 KRT35Q92764 455 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 EID2BQ96D98 161 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 NAF1Q96HR8 494 aaKnown RBP4.74□□□□□ -1.65
CLK3-219ENST00000567805 QKIQ96PU8 341 aaKnown RBP eCLIP4.74□□□□□ -1.65
CLK3-219ENST00000567805 PLEKHG4BQ96PX9 1271 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 VPS35Q96QK1 796 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 FCRL5Q96RD9 977 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 UBL7Q96S82 380 aaPredicted RBP4.74□□□□□ -1.65
CLK3-219ENST00000567805 CMKLR1Q99788 373 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 DPYSL5Q9BPU6 564 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 FERMT1Q9BQL6 677 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 HERPUD2Q9BSE4 406 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 SPATA16Q9BXB7 569 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 GPR63Q9BZJ6 419 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 B3GNT4Q9C0J1 378 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 RBSNQ9H1K0 784 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 CARD9Q9H257 536 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 GOLPH3Q9H4A6 298 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 TRABDQ9H4I3 376 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 STN1Q9H668 368 aaKnown RBP4.74□□□□□ -1.65
CLK3-219ENST00000567805 UBP1Q9NZI7 540 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.74□□□□□ -1.65
CLK3-219ENST00000567805 HACD3Q9P035 362 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 AKAP7Q9P0M2 348 aaPredicted RBP4.74□□□□□ -1.65
CLK3-219ENST00000567805 KLHL8Q9P2G9 620 aaPredicted RBP4.74□□□□□ -1.65
CLK3-219ENST00000567805 FAM153AQ9UHL3 310 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 ZNHIT2Q9UHR6 403 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 ACSL6Q9UKU0 697 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 TRHDEQ9UKU6 1024 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 ATXN7L1Q9ULK2 861 aaPredicted RBP4.74□□□□□ -1.65
CLK3-219ENST00000567805 TFR2Q9UP52 801 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 SHOC2Q9UQ13 582 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 ZNF711Q9Y462 761 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 PLEKHM1Q9Y4G2 1056 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 LOXL2Q9Y4K0 774 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 PCDHGA7Q9Y5G6 932 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 PCDHA3Q9Y5H8 950 aa4.74□□□□□ -1.65
CLK3-219ENST00000567805 OAS3Q9Y6K5 1087 aaKnown RBP4.74□□□□□ -1.65
CLK3-219ENST00000567805 ZFYVE26Q68DK2 2539 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 SDK2Q58EX2 2172 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 IGHV1OR21-1A0A087WYE8 117 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 KIR2DS5A0A0G2JLQ3 304 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 A0A0G2JNG1 304 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 IGHV5-10-1A0A0J9YXX1 117 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 CCDC66A2RUB6 948 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 A6NCN8 305 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 RCCD1A6NED2 376 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 OR5K4A6NMS3 321 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 EIF4E1BA6NMX2 242 aaKnown RBP4.73□□□□□ -1.65
CLK3-219ENST00000567805 H7C0C1 242 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 APOC4-APOC2K7ER74 178 aa4.73□□□□□ -1.65
CLK3-219ENST00000567805 KIR2DS3K7RE56 304 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms