RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 TPSAB1Q15661 275 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 SMAD1Q15797 465 aaKnown RBP13.36□□□□□ -0.27
CLK3-218ENST00000566926 PCSK7Q16549 785 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 DEFB133Q30KQ1 61 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 RD3Q7Z3Z2 195 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 MTERF4Q7Z6M4 381 aaKnown RBP13.36□□□□□ -0.27
CLK3-218ENST00000566926 HEATR4Q86WZ0 1026 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 ZNF567Q8N184 647 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 GLIS1Q8NBF1 620 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 MCUQ8NE86 351 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 SPATA22Q8NHS9 363 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 CCDC110Q8TBZ0 833 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 APOLD1Q96LR9 279 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 TRIB3Q96RU7 358 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 ABCG8Q9H221 673 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 GBA3Q9H227 469 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 ZFYVE1Q9HBF4 777 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 MOSPD1Q9UJG1 213 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 UNC13CQ8NB66 2214 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 CEP295Q9C0D2 2601 aa13.36□□□□□ -0.27
CLK3-218ENST00000566926 SCN8AQ9UQD0 1980 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 TMEM202A6NGA9 273 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 ANXA9O76027 345 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 GP1BAP07359 652 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 NFKB1P19838 968 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 CD68P34810 354 aaPredicted RBP13.35□□□□□ -0.27
CLK3-218ENST00000566926 SPINT3P49223 89 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 GEMP55040 296 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 ARL4CP56559 192 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 CDK3Q00526 305 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 MPP3Q13368 585 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 C1orf61Q13536 156 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 PEX6Q13608 980 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 GALNT3Q14435 633 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 PTPRRQ15256 657 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 TRADDQ15628 312 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 C6orf132Q5T0Z8 1188 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 DHRS13Q6UX07 377 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 ADAMTSL4Q6UY14 1074 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 CENPUQ71F23 418 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 KDELC2Q7Z4H8 507 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 PDIK1LQ8N165 341 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 NAT8LQ8N9F0 302 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 CPT1BQ92523 772 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 LGR4Q9BXB1 951 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 GPR63Q9BZJ6 419 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 TCEAL2Q9H3H9 227 aaPredicted RBP13.35□□□□□ -0.27
CLK3-218ENST00000566926 FAM83DQ9H4H8 585 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 TRABDQ9H4I3 376 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 C10orf88Q9H8K7 445 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 XAB2Q9HCS7 855 aaKnown RBP13.35□□□□□ -0.27
CLK3-218ENST00000566926 HACD3Q9P035 362 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 RSPH14Q9UHP6 348 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 CD84Q9UIB8 345 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 KLK13Q9UKR3 277 aa13.35□□□□□ -0.27
CLK3-218ENST00000566926 AAR2Q9Y312 384 aaKnown RBP13.35□□□□□ -0.27
CLK3-218ENST00000566926 LOC285095A0A1B0GVY8 99 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 PRSS38A1L453 326 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 TMEM8BA6NDV4 472 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 TP73O15350 636 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 YY2O15391 372 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 MLNP12872 115 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 JUPP14923 745 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 LMAN1P49257 510 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 WNT3AP56704 352 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 DHX9Q08211 1270 aaKnown RBP13.34□□□□□ -0.27
CLK3-218ENST00000566926 KCNJ11Q14654 390 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 NR0B2Q15466 257 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 HIF1AQ16665 826 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 CDKN3Q16667 212 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 ARMC3Q5W041 872 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 UNQ6494/PRO21346Q6UXR6 183 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 TRMT10CQ7L0Y3 403 aaKnown RBP13.34□□□□□ -0.27
CLK3-218ENST00000566926 TMC3Q7Z5M5 1100 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 CACTIN-AS1Q8N1I8 211 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 PELI3Q8N2H9 469 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 OR6C4Q8NGE1 309 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 OR1E3Q8WZA6 343 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 NAT6Q93015 286 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 SCAMP4Q969E2 229 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 PDXPQ96GD0 296 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 HIC2Q96JB3 615 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 TTC25Q96NG3 672 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 CNTNAP3BQ96NU0 1288 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 SMIM14Q96QK8 99 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 BOCQ9BWV1 1114 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 FSD1LQ9BXM9 530 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 CNTNAP3Q9BZ76 1288 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 CLPBQ9H078 707 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 CYP4F12Q9HCS2 524 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 FGF22Q9HCT0 170 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 UBP1Q9NZI7 540 aa13.34□□□□□ -0.27
CLK3-218ENST00000566926 PNMA8BQ9ULN7 279 aaPredicted RBP13.34□□□□□ -0.27
CLK3-218ENST00000566926 MAP1BP46821 2468 aaKnown RBP13.34□□□□□ -0.27
CLK3-218ENST00000566926 A0A0U1RQS6 177 aa13.33□□□□□ -0.28
CLK3-218ENST00000566926 EME2A4GXA9 379 aaPredicted RBP13.33□□□□□ -0.28
CLK3-218ENST00000566926 IVLP07476 585 aa13.33□□□□□ -0.28
CLK3-218ENST00000566926 APRTP07741 180 aa13.33□□□□□ -0.28
CLK3-218ENST00000566926 HLA-DPA1P20036 260 aa13.33□□□□□ -0.28
CLK3-218ENST00000566926 CASP8Q14790 479 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms