RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 RBFAQ8N0V3 343 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 HMGB4Q8WW32 186 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 AARSD1Q9BTE6 412 aaKnown RBP18.6■□□□□ 0.57
COMMD4-213ENST00000565834 SLC13A1Q9BZW2 595 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 VPS11Q9H270 941 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 SMOXQ9NWM0 555 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 MKS1Q9NXB0 559 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 PIKFYVEQ9Y2I7 2098 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 A0A096LPK6 155 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 STK25O00506 426 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 TM7SF2O76062 418 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 CRABP2P29373 138 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 ADPRHP54922 357 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 ADARP55265 1226 aaKnown RBP18.6■□□□□ 0.57
COMMD4-213ENST00000565834 ITIH4Q14624 930 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 ZKSCAN8Q15776 578 aaPredicted RBP18.6■□□□□ 0.57
COMMD4-213ENST00000565834 SETMARQ53H47 684 aaPredicted RBP18.6■□□□□ 0.57
COMMD4-213ENST00000565834 TAF1BQ53T94 588 aaPredicted RBP18.6■□□□□ 0.57
COMMD4-213ENST00000565834 ANKRD42Q8N9B4 389 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 CLPBQ9H078 707 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 IQCGQ9H095 443 aaKnown RBP18.6■□□□□ 0.57
COMMD4-213ENST00000565834 KCTD5Q9NXV2 234 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 ZDHHC3Q9NYG2 299 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 NKIRAS1Q9NYS0 192 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 TLK1Q9UKI8 766 aa18.6■□□□□ 0.57
COMMD4-213ENST00000565834 IGLON5A6NGN9 336 aa18.59■□□□□ 0.57
COMMD4-213ENST00000565834 PRMT5O14744 637 aaPredicted RBP18.59■□□□□ 0.57
COMMD4-213ENST00000565834 PHGDHO43175 533 aaKnown RBP18.59■□□□□ 0.57
COMMD4-213ENST00000565834 ESR1P03372 595 aa18.59■□□□□ 0.57
COMMD4-213ENST00000565834 C2P06681 752 aa18.59■□□□□ 0.57
COMMD4-213ENST00000565834 PKMP14618 531 aaKnown RBP18.59■□□□□ 0.57
COMMD4-213ENST00000565834 CCT5P48643 541 aa18.59■□□□□ 0.57
COMMD4-213ENST00000565834 CSRP3P50461 194 aa18.59■□□□□ 0.57
COMMD4-213ENST00000565834 SLC18A1P54219 525 aa18.59■□□□□ 0.57
COMMD4-213ENST00000565834 MPP2Q14168 576 aa18.59■□□□□ 0.57
COMMD4-213ENST00000565834 GAS6Q14393 721 aa18.59■□□□□ 0.57
COMMD4-213ENST00000565834 PPM1JQ5JR12 505 aa18.59■□□□□ 0.57
COMMD4-213ENST00000565834 CEP97Q8IW35 865 aa18.59■□□□□ 0.57
COMMD4-213ENST00000565834 PGBD3Q8N328 593 aa18.59■□□□□ 0.57
COMMD4-213ENST00000565834 MDM1Q8TC05 714 aa18.59■□□□□ 0.57
COMMD4-213ENST00000565834 BIRC8Q96P09 236 aa18.59■□□□□ 0.57
COMMD4-213ENST00000565834 COPS8Q99627 209 aa18.59■□□□□ 0.57
COMMD4-213ENST00000565834 OLFM1Q99784 485 aa18.59■□□□□ 0.57
COMMD4-213ENST00000565834 P2RY12Q9H244 342 aa18.59■□□□□ 0.57
COMMD4-213ENST00000565834 PCDHB1Q9Y5F3 818 aa18.59■□□□□ 0.57
COMMD4-213ENST00000565834 COMMD10Q9Y6G5 202 aa18.59■□□□□ 0.57
COMMD4-213ENST00000565834 DOCK9Q9BZ29 2069 aa18.59■□□□□ 0.57
COMMD4-213ENST00000565834 FADS2P1A8MWK0 482 aa18.58■□□□□ 0.57
COMMD4-213ENST00000565834 FDXRP22570 491 aa18.58■□□□□ 0.57
COMMD4-213ENST00000565834 RPS3P23396 243 aaKnown RBP eCLIP18.58■□□□□ 0.579e-8■■■■□ 25.4
COMMD4-213ENST00000565834 CRHR1P34998 444 aa18.58■□□□□ 0.57
COMMD4-213ENST00000565834 RPA3P35244 121 aaPredicted RBP18.58■□□□□ 0.57
COMMD4-213ENST00000565834 CDKN2DP55273 166 aa18.58■□□□□ 0.57
COMMD4-213ENST00000565834 RPS21P63220 83 aaKnown RBP18.58■□□□□ 0.57
COMMD4-213ENST00000565834 DPTQ07507 201 aa18.58■□□□□ 0.57
COMMD4-213ENST00000565834 GPRC6AQ5T6X5 926 aa18.58■□□□□ 0.57
COMMD4-213ENST00000565834 KIAA1161Q6NSJ0 714 aa18.58■□□□□ 0.57
COMMD4-213ENST00000565834 FAM124AQ86V42 546 aa18.58■□□□□ 0.57
COMMD4-213ENST00000565834 PJA1Q8NG27 643 aa18.58■□□□□ 0.57
COMMD4-213ENST00000565834 GDAP1Q8TB36 358 aa18.58■□□□□ 0.57
COMMD4-213ENST00000565834 VPS35Q96QK1 796 aa18.58■□□□□ 0.57
COMMD4-213ENST00000565834 BOCQ9BWV1 1114 aa18.58■□□□□ 0.57
COMMD4-213ENST00000565834 OSBPL6Q9BZF3 934 aa18.58■□□□□ 0.57
COMMD4-213ENST00000565834 PREBQ9HCU5 417 aa18.58■□□□□ 0.57
COMMD4-213ENST00000565834 CD320Q9NPF0 282 aa18.58■□□□□ 0.57
COMMD4-213ENST00000565834 TMPRSS11EQ9UL52 423 aa18.58■□□□□ 0.57
COMMD4-213ENST00000565834 PRR23AA6NEV1 266 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 GLRA3O75311 464 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 RHOBTB1O94844 696 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 ZWINTO95229 277 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 SLC35E2BP0CK96 405 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 CHN1P15882 459 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 NSG1P42857 185 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 TPMTP51580 245 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 PGGT1BP53609 377 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 ZNF460Q14592 562 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 CTSL3PQ5NE16 218 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 SEL1L3Q68CR1 1132 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 NLRP8Q86W28 1048 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 TSTD1Q8NFU3 115 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 MGARPQ8TDB4 240 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 TCP10LQ8TDR4 215 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 CCDC97Q96F63 343 aaPredicted RBP18.57■□□□□ 0.56
COMMD4-213ENST00000565834 TAS2R13Q9NYV9 303 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 DCDC2Q9UHG0 476 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 GNPTGQ9UJJ9 305 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 ANKRD6Q9Y2G4 727 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 ACOT9Q9Y305 439 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 IGLV3-16A0A075B6K0 115 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 TBC1D3DA0A087WVF3 549 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 TBC1D3IA0A087WXS9 549 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 TBC1D3EA0A087X179 549 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 TBC1D3KA0A087X1G2 549 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 TBC1D3FA6NER0 549 aaPredicted RBP18.57■□□□□ 0.56
COMMD4-213ENST00000565834 TBC1D3LB9A6J9 549 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 TM9SF1O15321 606 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 TBC1D3HP0C7X1 549 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 AKT1P31749 480 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 GPR1P46091 355 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 SEPT7Q16181 437 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms