RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 PCDH20Q8N6Y1 951 aaKnown RBP4.43□□□□□ -1.7
CHD9-215ENST00000565442 TMED6Q8WW62 240 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 ERP27Q96DN0 273 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 NUDCD1Q96RS6 583 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 SMC6Q96SB8 1091 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 PAFAH2Q99487 392 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 SLF1Q9BQI6 1058 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 NTPCRQ9BSD7 190 aaKnown RBP4.43□□□□□ -1.7
CHD9-215ENST00000565442 C1QTNF1Q9BXJ1 281 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 TEX12Q9BXU0 123 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 SLCO5A1Q9H2Y9 848 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 ARHGEF38Q9NXL2 777 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 NKIRAS2Q9NYR9 191 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 MRPL15Q9P015 296 aaKnown RBP4.43□□□□□ -1.7
CHD9-215ENST00000565442 STK39Q9UEW8 545 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 ACSL5Q9ULC5 683 aa4.43□□□□□ -1.7
CHD9-215ENST00000565442 A0A1W2PR77 199 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 KANSL1LA0AUZ9 987 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 LRRC72A6NJI9 287 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 PLPP2O43688 288 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 ACAA1P09110 424 aaPredicted RBP4.42□□□□□ -1.7
CHD9-215ENST00000565442 TGFB3P10600 412 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 MMP9P14780 707 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 RRM1P23921 792 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 CDKN2AP42771 156 aaKnown RBP4.42□□□□□ -1.7
CHD9-215ENST00000565442 ECT2LQ008S8 904 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 SREBF2Q12772 1141 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 MAD2L1Q13257 205 aaPredicted RBP4.42□□□□□ -1.7
CHD9-215ENST00000565442 KCNC3Q14003 757 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 PCLAFQ15004 111 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 HLFQ16534 295 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 NTRK2Q16620 822 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 ATP13A5Q4VNC0 1218 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 KCNT1Q5JUK3 1230 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 RARS2Q5T160 578 aaKnown RBP4.42□□□□□ -1.7
CHD9-215ENST00000565442 FRG2Q64ET8 278 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.42□□□□□ -1.7
CHD9-215ENST00000565442 CCDC190Q86UF4 302 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 ARID3BQ8IVW6 561 aaPredicted RBP4.42□□□□□ -1.7
CHD9-215ENST00000565442 CLIP4Q8N3C7 705 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 LSMEM1Q8N8F7 131 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 B4GALNT2Q8NHY0 566 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 TRPC4APQ8TEL6 797 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 WFIKKN2Q8TEU8 576 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 FAM216AQ8WUB2 273 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 MOAP1Q96BY2 351 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 MTBPQ96DY7 904 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 C3orf30Q96M34 536 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 PADI1Q9ULC6 663 aa4.42□□□□□ -1.7
CHD9-215ENST00000565442 MAGED1Q9Y5V3 778 aaPredicted RBP4.42□□□□□ -1.7
CHD9-215ENST00000565442 EVPLQ92817 2033 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 SH2B2O14492 632 aaPredicted RBP4.41□□□□□ -1.7
CHD9-215ENST00000565442 SMAD9O15198 467 aaKnown RBP4.41□□□□□ -1.7
CHD9-215ENST00000565442 PAPSS1O43252 624 aaPredicted RBP4.41□□□□□ -1.7
CHD9-215ENST00000565442 ADAM20O43506 726 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 IGHV4-30-4P0DP06 118 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 HSD17B4P51659 736 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 CLCNKAP51800 687 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 TAS2R38P59533 333 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 SEC61BP60468 96 aaKnown RBP4.41□□□□□ -1.7
CHD9-215ENST00000565442 TRAF2Q12933 501 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 MYBPHQ13203 477 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 SETMARQ53H47 684 aaPredicted RBP4.41□□□□□ -1.7
CHD9-215ENST00000565442 IGSF11Q5DX21 431 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 RHBDF2Q6PJF5 856 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 KRBA2Q6ZNG9 492 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 NRROSQ86YC3 692 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 CHERPQ8IWX8 916 aaKnown RBP4.41□□□□□ -1.7
CHD9-215ENST00000565442 ZNF34Q8IZ26 560 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 RASGEF1CQ8N431 466 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 ACVR1CQ8NER5 493 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 GSDMBQ8TAX9 411 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 LRRC59Q96AG4 307 aaKnown RBP4.41□□□□□ -1.7
CHD9-215ENST00000565442 SCMH1Q96GD3 660 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 CCDC34Q96HJ3 373 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 ABHD1Q96SE0 405 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 PCYT2Q99447 389 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 SEZ6LQ9BYH1 1024 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 DNAJC18Q9H819 358 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 GIMAP4Q9NUV9 329 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 WSB2Q9NYS7 404 aaPredicted RBP4.41□□□□□ -1.7
CHD9-215ENST00000565442 C1RLQ9NZP8 487 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 UBA2Q9UBT2 640 aaPredicted RBP4.41□□□□□ -1.7
CHD9-215ENST00000565442 PADI3Q9ULW8 664 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 PLAGL1Q9UM63 463 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 EXO1Q9UQ84 846 aaKnown RBP4.41□□□□□ -1.7
CHD9-215ENST00000565442 KLHL20Q9Y2M5 609 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 LOXL2Q9Y4K0 774 aa4.41□□□□□ -1.7
CHD9-215ENST00000565442 C4orf47A7E2U8 309 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 MAP2K7O14733 419 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 HS3ST1O14792 307 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 ADAMDEC1O15204 470 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 GAGE7O76087 117 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 DDNO94850 711 aaPredicted RBP4.4□□□□□ -1.71
CHD9-215ENST00000565442 KDM4BO94953 1096 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 CLDN14O95500 239 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 ADRB2P07550 413 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 GAGE12FP0CL80 117 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 GAGE12GP0CL81 117 aa4.4□□□□□ -1.71
CHD9-215ENST00000565442 GAGE12IP0CL82 117 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms