RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 VPS35Q96QK1 796 aa12.18□□□□□ -0.46
SPG7-211ENST00000565370 WDR24Q96S15 920 aa12.18□□□□□ -0.46
SPG7-211ENST00000565370 FAM118BQ9BPY3 351 aa12.18□□□□□ -0.46
SPG7-211ENST00000565370 LRRN3Q9H3W5 708 aa12.18□□□□□ -0.46
SPG7-211ENST00000565370 EPB41L5Q9HCM4 733 aa12.18□□□□□ -0.46
SPG7-211ENST00000565370 THSD1Q9NS62 852 aa12.18□□□□□ -0.46
SPG7-211ENST00000565370 ZNHIT2Q9UHR6 403 aa12.18□□□□□ -0.46
SPG7-211ENST00000565370 SPO11Q9Y5K1 396 aa12.18□□□□□ -0.46
SPG7-211ENST00000565370 OAS3Q9Y6K5 1087 aaKnown RBP12.18□□□□□ -0.46
SPG7-211ENST00000565370 RNF215Q9Y6U7 377 aa12.18□□□□□ -0.46
SPG7-211ENST00000565370 COL27A1Q8IZC6 1860 aaPredicted RBP12.18□□□□□ -0.46
SPG7-211ENST00000565370 ADAMTS20P59510 1910 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 ASXL3Q9C0F0 2248 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 VEGFDO43915 354 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 DNAJC6O75061 913 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 ECEL1O95672 775 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 MPOP05164 745 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 ACP5P13686 325 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 RBMS1P29558 406 aaKnown RBP12.17□□□□□ -0.46
SPG7-211ENST00000565370 MLLT3P42568 568 aaPredicted RBP12.17□□□□□ -0.46
SPG7-211ENST00000565370 CHRNA4P43681 627 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 LSSP48449 732 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 PCBP4P57723 403 aaKnown RBP12.17□□□□□ -0.46
SPG7-211ENST00000565370 CCL7P80098 99 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 PDE1BQ01064 536 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 EIF3IQ13347 325 aaKnown RBP12.17□□□□□ -0.46
SPG7-211ENST00000565370 ITGA9Q13797 1035 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 CLPPQ16740 277 aaPredicted RBP12.17□□□□□ -0.46
SPG7-211ENST00000565370 INSCQ1MX18 579 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 P3H1Q32P28 736 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 FAM182AQ5T1J6 154 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 AADACL2Q6P093 401 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 Q8N9G6 341 aaPredicted RBP12.17□□□□□ -0.46
SPG7-211ENST00000565370 WDR36Q8NI36 951 aaKnown RBP12.17□□□□□ -0.46
SPG7-211ENST00000565370 SNIP1Q8TAD8 396 aaKnown RBP12.17□□□□□ -0.46
SPG7-211ENST00000565370 PTCD2Q8WV60 388 aaKnown RBP12.17□□□□□ -0.46
SPG7-211ENST00000565370 ATXN7L3BQ96GX2 97 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 LIN37Q96GY3 246 aaPredicted RBP12.17□□□□□ -0.46
SPG7-211ENST00000565370 ZNF578Q96N58 590 aaPredicted RBP12.17□□□□□ -0.46
SPG7-211ENST00000565370 TTC25Q96NG3 672 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 DCBLD2Q96PD2 775 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 FRMD8P1Q9BZ68 369 aaPredicted RBP12.17□□□□□ -0.46
SPG7-211ENST00000565370 OR2AG1Q9H205 316 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 SPATS2LQ9NUQ6 558 aaKnown RBP12.17□□□□□ -0.46
SPG7-211ENST00000565370 FEZ2Q9UHY8 353 aaPredicted RBP12.17□□□□□ -0.46
SPG7-211ENST00000565370 RABGEF1Q9UJ41 708 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 SATB2Q9UPW6 733 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 ENTPD2Q9Y5L3 495 aa12.17□□□□□ -0.46
SPG7-211ENST00000565370 ARHGEF17Q96PE2 2063 aaPredicted RBP12.17□□□□□ -0.46
SPG7-211ENST00000565370 ZNF106Q9H2Y7 1883 aaKnown RBP12.17□□□□□ -0.46
SPG7-211ENST00000565370 GLYATL1P3A0A0U1RQE8 302 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 A0A0U1RQJ8 604 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 C2orf81A6NN90 581 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 TAF4O00268 1085 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 STX7O15400 261 aaKnown RBP12.16□□□□□ -0.46
SPG7-211ENST00000565370 GRID2O43424 1007 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 NUAK1O60285 661 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 DXOO77932 396 aaKnown RBP12.16□□□□□ -0.46
SPG7-211ENST00000565370 FUCA1P04066 466 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 VCLP18206 1134 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 CCKBRP32239 447 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 ABCG1P45844 678 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 GPR3P46089 330 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 PPM1FP49593 454 aaPredicted RBP12.16□□□□□ -0.46
SPG7-211ENST00000565370 ERVPABLB-1P60509 514 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 KLF1Q13351 362 aaPredicted RBP12.16□□□□□ -0.46
SPG7-211ENST00000565370 IGF2-ASQ6U949 168 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 CRTC3Q6UUV7 619 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 ZNF438Q7Z4V0 828 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 LRRTM4Q86VH4 590 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 NAGSQ8N159 534 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 ARL14Q8N4G2 192 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 TTC30BQ8N4P2 665 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 CCDC110Q8TBZ0 833 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 FGF11Q92914 225 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 TMEM159Q96B96 161 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 EID2BQ96D98 161 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 TBL1YQ9BQ87 522 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 OSGEPL1Q9H4B0 414 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 C10orf88Q9H8K7 445 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 TRIM39Q9HCM9 518 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 BPIFA1Q9NP55 256 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 AKAP7Q9P0M2 348 aaPredicted RBP12.16□□□□□ -0.46
SPG7-211ENST00000565370 ATXN10Q9UBB4 475 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 CNOT6Q9ULM6 557 aaKnown RBP12.16□□□□□ -0.46
SPG7-211ENST00000565370 KCNK6Q9Y257 313 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 PCDHGA8Q9Y5G5 932 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 FREM2Q5SZK8 3169 aa12.16□□□□□ -0.46
SPG7-211ENST00000565370 DMXL2Q8TDJ6 3036 aa12.15□□□□□ -0.46
SPG7-211ENST00000565370 A0A087WV48 116 aa12.15□□□□□ -0.46
SPG7-211ENST00000565370 A0A1W2PQM1 296 aa12.15□□□□□ -0.46
SPG7-211ENST00000565370 C5orf60A6NFR6 353 aa12.15□□□□□ -0.46
SPG7-211ENST00000565370 OR5K4A6NMS3 321 aa12.15□□□□□ -0.46
SPG7-211ENST00000565370 AURKAO14965 403 aa12.15□□□□□ -0.46
SPG7-211ENST00000565370 KMOO15229 486 aa12.15□□□□□ -0.46
SPG7-211ENST00000565370 DUX1O43812 170 aa12.15□□□□□ -0.46
SPG7-211ENST00000565370 CRTAMO95727 393 aa12.15□□□□□ -0.46
SPG7-211ENST00000565370 CPNE6O95741 557 aa12.15□□□□□ -0.46
SPG7-211ENST00000565370 ZNF8P17098 575 aaPredicted RBP12.15□□□□□ -0.46
SPG7-211ENST00000565370 AKT1P31749 480 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms