RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 COPG2Q9UBF2 871 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 OR14J1Q9UGF5 321 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 TCF19Q9Y242 345 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 CLIC4Q9Y696 253 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 MAU2Q9Y6X3 613 aa4.59□□□□□ -1.67
UBR1-205ENST00000564540 NPHP1O15259 732 aa4.58□□□□□ -1.68
UBR1-205ENST00000564540 EIF3DO15371 548 aaKnown RBP eCLIP4.58□□□□□ -1.68
UBR1-205ENST00000564540 KCNN4O15554 427 aa4.58□□□□□ -1.68
UBR1-205ENST00000564540 JRKO75564 520 aa4.58□□□□□ -1.68
UBR1-205ENST00000564540 PRSS1P07477 247 aa4.58□□□□□ -1.68
UBR1-205ENST00000564540 UGT1A1P22309 533 aa4.58□□□□□ -1.68
UBR1-205ENST00000564540 CDKN1AP38936 164 aa4.58□□□□□ -1.68
UBR1-205ENST00000564540 HOXA1P49639 335 aaPredicted RBP4.58□□□□□ -1.68
UBR1-205ENST00000564540 CCR9P51686 369 aa4.58□□□□□ -1.68
UBR1-205ENST00000564540 RPL24P83731 157 aaKnown RBP4.58□□□□□ -1.68
UBR1-205ENST00000564540 SREBF2Q12772 1141 aa4.58□□□□□ -1.68
UBR1-205ENST00000564540 TBCEQ15813 527 aaPredicted RBP4.58□□□□□ -1.68
UBR1-205ENST00000564540 KRTCAP3Q53RY4 240 aa4.58□□□□□ -1.68
UBR1-205ENST00000564540 CEP85LQ5SZL2 805 aa4.58□□□□□ -1.68
UBR1-205ENST00000564540 ADAM5Q6NVV9 412 aa4.58□□□□□ -1.68
UBR1-205ENST00000564540 PAPD4Q6PIY7 484 aaKnown RBP4.58□□□□□ -1.68
UBR1-205ENST00000564540 CYP20A1Q6UW02 462 aa4.58□□□□□ -1.68
UBR1-205ENST00000564540 DIS3L2Q8IYB7 885 aaKnown RBP4.58□□□□□ -1.68
UBR1-205ENST00000564540 ADSSL1Q8N142 457 aa4.58□□□□□ -1.68
UBR1-205ENST00000564540 FAM149B1Q96BN6 582 aa4.58□□□□□ -1.68
UBR1-205ENST00000564540 PIGMQ9H3S5 423 aa4.58□□□□□ -1.68
UBR1-205ENST00000564540 A0A1W2PP11 408 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 ATP2A1O14983 1001 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 CGAP01215 116 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 TERF1P54274 439 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 PLIN5Q00G26 463 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 CSTF3Q12996 717 aaKnown RBP4.57□□□□□ -1.68
UBR1-205ENST00000564540 G3BP1Q13283 466 aaKnown RBP eCLIP4.57□□□□□ -1.68
UBR1-205ENST00000564540 TSTQ16762 297 aaKnown RBP4.57□□□□□ -1.68
UBR1-205ENST00000564540 MYLK3Q32MK0 819 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 GORABQ5T7V8 394 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 INTS11Q5TA45 600 aaKnown RBP4.57□□□□□ -1.68
UBR1-205ENST00000564540 LCN10Q6JVE6 187 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 ZNF704Q6ZNC4 412 aaPredicted RBP4.57□□□□□ -1.68
UBR1-205ENST00000564540 KLHDC9Q8NEP7 349 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 OR1J2Q8NGS2 313 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 TMEM255BQ8WV15 326 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 ARHGEF26Q96DR7 871 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 ST6GAL2Q96JF0 529 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 NEUROD6Q96NK8 337 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 MAP7D2Q96T17 732 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 LRMDAQ9H2I8 198 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 ZNF696Q9H7X3 374 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 MARCH4Q9P2E8 410 aaPredicted RBP4.57□□□□□ -1.68
UBR1-205ENST00000564540 STK39Q9UEW8 545 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 PGAP2Q9UHJ9 254 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 POLG2Q9UHN1 485 aa4.57□□□□□ -1.68
UBR1-205ENST00000564540 IGLV5-45A0A087WSX0 123 aa4.56□□□□□ -1.68
UBR1-205ENST00000564540 FAM237BA0A1B0GVD1 139 aa4.56□□□□□ -1.68
UBR1-205ENST00000564540 OR5K3A6NET4 321 aa4.56□□□□□ -1.68
UBR1-205ENST00000564540 SYNGR3O43761 229 aa4.56□□□□□ -1.68
UBR1-205ENST00000564540 IGHV4-39P01824 125 aa4.56□□□□□ -1.68
UBR1-205ENST00000564540 ARCN1P48444 511 aaKnown RBP4.56□□□□□ -1.68
UBR1-205ENST00000564540 MMP14P50281 582 aa4.56□□□□□ -1.68
UBR1-205ENST00000564540 HILS1P60008 231 aa4.56□□□□□ -1.68
UBR1-205ENST00000564540 PNLIPRP3Q17RR3 467 aa4.56□□□□□ -1.68
UBR1-205ENST00000564540 ZNF805Q5CZA5 627 aa4.56□□□□□ -1.68
UBR1-205ENST00000564540 LRIF1Q5T3J3 769 aa4.56□□□□□ -1.68
UBR1-205ENST00000564540 NSUN5P2Q63ZY6 315 aa4.56□□□□□ -1.68
UBR1-205ENST00000564540 SDCCAG8Q86SQ7 713 aaPredicted RBP4.56□□□□□ -1.68
UBR1-205ENST00000564540 RBM15BQ8NDT2 890 aaKnown RBP4.56□□□□□ -1.68
UBR1-205ENST00000564540 ETNPPLQ8TBG4 499 aa4.56□□□□□ -1.68
UBR1-205ENST00000564540 GRAPLQ8TC17 118 aaPredicted RBP4.56□□□□□ -1.68
UBR1-205ENST00000564540 ZNF354BQ96LW1 612 aa4.56□□□□□ -1.68
UBR1-205ENST00000564540 PDCL3Q9H2J4 239 aa4.56□□□□□ -1.68
UBR1-205ENST00000564540 UPF2Q9HAU5 1272 aaKnown RBP4.56□□□□□ -1.68
UBR1-205ENST00000564540 TCP11L1Q9NUJ3 509 aa4.56□□□□□ -1.68
UBR1-205ENST00000564540 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.56□□□□□ -1.68
UBR1-205ENST00000564540 KLHL9Q9P2J3 617 aa4.56□□□□□ -1.68
UBR1-205ENST00000564540 LIMA1Q9UHB6 759 aaKnown RBP4.56□□□□□ -1.68
UBR1-205ENST00000564540 KCNE2Q9Y6J6 123 aa4.56□□□□□ -1.68
UBR1-205ENST00000564540 C5orf60A6NFR6 353 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 EIF4E1BA6NMX2 242 aaKnown RBP4.55□□□□□ -1.68
UBR1-205ENST00000564540 H3BQ06 376 aaPredicted RBP4.55□□□□□ -1.68
UBR1-205ENST00000564540 TMEM178BH3BS89 294 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 SLC25A12O75746 678 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 RTN3O95197 1032 aaPredicted RBP4.55□□□□□ -1.68
UBR1-205ENST00000564540 IPO7O95373 1038 aaKnown RBP4.55□□□□□ -1.68
UBR1-205ENST00000564540 ICAM1P05362 532 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 PAX1P15863 534 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 BSGP35613 385 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 AHRP35869 848 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 ATP12AP54707 1039 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 RPS3AP61247 264 aaKnown RBP4.55□□□□□ -1.68
UBR1-205ENST00000564540 GAGE5Q13069 117 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 GAGE6Q13070 117 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 MMS22LQ6ZRQ5 1243 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 SEPT14Q6ZU15 432 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 DGLUCYQ7Z3D6 616 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 PCYOX1LQ8NBM8 494 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 HM13Q8TCT9 377 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 UTP15Q8TED0 518 aaKnown RBP4.55□□□□□ -1.68
UBR1-205ENST00000564540 RFFLQ8WZ73 363 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 PHF21AQ96BD5 680 aa4.55□□□□□ -1.68
UBR1-205ENST00000564540 ZNF524Q96C55 264 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms