RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 TRAF2Q12933 501 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 NR1D2Q14995 579 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 ZIK1Q3SY52 487 aaPredicted RBP10.4□□□□□ -0.74
RNF40-204ENST00000563683 SYTL3Q4VX76 610 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 COLGALT2Q8IYK4 626 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 NKAPQ8N5F7 415 aaKnown RBP10.4□□□□□ -0.74
RNF40-204ENST00000563683 ANKFN1Q8N957 763 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 OR9I1Q8NGQ6 314 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 TBC1D15Q8TC07 691 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 ASB2Q96Q27 587 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 SLC2A13Q96QE2 648 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 TCF12Q99081 682 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 DPY30Q9C005 99 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 RPF2Q9H7B2 306 aaKnown RBP10.4□□□□□ -0.74
RNF40-204ENST00000563683 PARVBQ9HBI1 364 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 GIN1Q9NXP7 522 aa10.4□□□□□ -0.74
RNF40-204ENST00000563683 MYADML2A6NDP7 307 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 EVPLLA8MZ36 301 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 HOXA2O43364 376 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 SNAP91O60641 907 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 ALDH1A1P00352 501 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 LDLRP01130 860 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 EIF2S1P05198 315 aaKnown RBP10.4□□□□□ -0.75
RNF40-204ENST00000563683 URODP06132 367 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 HOXB8P17481 243 aaPredicted RBP10.4□□□□□ -0.75
RNF40-204ENST00000563683 TACR2P21452 398 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 DCKP27707 260 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 ACVRL1P37023 503 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 PRKCZQ05513 592 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 BCL2L1Q07817 233 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 HSPA14Q0VDF9 509 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 SPPL2CQ8IUH8 684 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 PDPRQ8NCN5 879 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 PTCD2Q8WV60 388 aaKnown RBP10.4□□□□□ -0.75
RNF40-204ENST00000563683 TRUB1Q8WWH5 349 aaKnown RBP10.4□□□□□ -0.75
RNF40-204ENST00000563683 TFAP2CQ92754 450 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 ELOVL6Q9H5J4 265 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 LIMD1Q9UGP4 676 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 PNMA8BQ9ULN7 279 aaPredicted RBP10.4□□□□□ -0.75
RNF40-204ENST00000563683 B3GNT3Q9Y2A9 372 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 COPG1Q9Y678 874 aaKnown RBP10.4□□□□□ -0.75
RNF40-204ENST00000563683 RGPD3A6NKT7 1758 aaPredicted RBP10.4□□□□□ -0.75
RNF40-204ENST00000563683 RGPD4Q7Z3J3 1758 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 SIPA1L1O43166 1804 aa10.4□□□□□ -0.75
RNF40-204ENST00000563683 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.39□□□□□ -0.75
RNF40-204ENST00000563683 RAD51BO15315 384 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 LRG1P02750 347 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 PPP3CCP48454 512 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 PSMD8P48556 350 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 ACAP2Q15057 778 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 TSNQ15631 228 aaKnown RBP10.39□□□□□ -0.75
RNF40-204ENST00000563683 ZBTB6Q15916 424 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 TRIM16LQ309B1 348 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 PKDCCQ504Y2 493 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 IRAK1BP1Q5VVH5 260 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 GPR107Q5VW38 600 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 FAM151BQ6UXP7 276 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 NAPRTQ6XQN6 538 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 SLC15A3Q8IY34 581 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 OR10T2Q8NGX3 314 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 GRIN3AQ8TCU5 1115 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 DUS3LQ96G46 650 aaKnown RBP10.39□□□□□ -0.75
RNF40-204ENST00000563683 HMX1Q9NP08 348 aaPredicted RBP10.39□□□□□ -0.75
RNF40-204ENST00000563683 C8orf4Q9NR00 106 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 CDC14AQ9UNH5 594 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 NPEPPSL1A6NEC2 478 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 G3V2L1 256 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 H3BMQ9 156 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 TBC1D4O60343 1298 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 TBL1XO60907 577 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 RPP40O75818 363 aaKnown RBP10.39□□□□□ -0.75
RNF40-204ENST00000563683 ZNF682O95780 498 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 NDST3O95803 873 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 C1RP00736 705 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 HDCP19113 662 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 EPHB3P54753 998 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 SP3Q02447 781 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 NEDD8Q15843 81 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 NHSL2Q5HYW2 709 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 UBXN11Q5T124 520 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 EGFLAMQ63HQ2 1017 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 ZNF280BQ86YH2 543 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 DBF4BQ8NFT6 615 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 FBXO30Q8TB52 745 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 SPPL2BQ8TCT7 592 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 TWIST2Q8WVJ9 160 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 COG8Q96MW5 612 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 UHRF1Q96T88 793 aaPredicted RBP10.39□□□□□ -0.75
RNF40-204ENST00000563683 DOK1Q99704 481 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 TRMOQ9BU70 441 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 C1orf232A0A0U1RR37 186 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 DYTNA2CJ06 578 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 A8MT66 165 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 ATE1O95260 518 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 S100A1P23297 94 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 DPP6P42658 865 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 TTPAP49638 278 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 GNA12Q03113 381 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 UPP1Q16831 310 aa10.39□□□□□ -0.75
RNF40-204ENST00000563683 ALFQ53S48 1182 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms