RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 IFT20Q8IY31 132 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 LGI2Q8N0V4 545 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 AHI1Q8N157 1196 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 CELF5Q8N6W0 485 aaKnown RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 PLD5Q8N7P1 536 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 PRELID2Q8N945 189 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 ZNF557Q8N988 423 aaPredicted RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 CCNYQ8ND76 341 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 CPT1CQ8TCG5 803 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 CCHCR1Q8TD31 782 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 DDI1Q8WTU0 396 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 NSMCE1Q8WV22 266 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 TFB1MQ8WVM0 346 aaKnown RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 C1orf54Q8WWF1 131 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 ZNF707Q96C28 371 aaPredicted RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 FAF2Q96CS3 445 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 OTUB2Q96DC9 234 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 PABPC5Q96DU9 382 aaKnown RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 TCEAL4Q96EI5 215 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 TMA16Q96EY4 203 aaKnown RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 CCDC114Q96M63 670 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 NECTIN4Q96NY8 510 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 RPRD1AQ96P16 312 aaPredicted RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 DCLRE1CQ96SD1 692 aaKnown RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 APOL5Q9BWW9 433 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 MAGEB5Q9BZ81 275 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 ENKD1Q9H0I2 346 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 DDX47Q9H0S4 455 aaKnown RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 RAB17Q9H0T7 212 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 KIF9Q9HAQ2 790 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 RBM12Q9NTZ6 932 aaKnown RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 HAUS2Q9NVX0 235 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 THG1LQ9NWX6 298 aaKnown RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 ING3Q9NXR8 418 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 GDE1Q9NZC3 331 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 SMARCAL1Q9NZC9 954 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 PCYOX1Q9UHG3 505 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 EIF2B4Q9UI10 523 aaKnown RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 AGO1Q9UL18 857 aaKnown RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 VANGL2Q9ULK5 521 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 HPCAL4Q9UM19 191 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 ARHGAP26Q9UNA1 814 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 UTP11Q9Y3A2 253 aaKnown RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 XIRP2A4UGR9 3374 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 TRIOBPQ9H2D6 2365 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 CUL9Q8IWT3 2517 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.69□□□□□ -1.66
CDR2-203ENST00000563573 GOLGA6L7A0A1B0GV03 622 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 TCRBV7S2A1N4TA0A589 114 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 BCLAF3A2AJT9 711 aaKnown RBP4.69□□□□□ -1.66
CDR2-203ENST00000563573 TARSL2A2RTX5 802 aaKnown RBP4.69□□□□□ -1.66
CDR2-203ENST00000563573 ARHGAP42A6NI28 874 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 ZNF891A8MT65 544 aaPredicted RBP4.69□□□□□ -1.66
CDR2-203ENST00000563573 H0Y626 953 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 SGK1O00141 431 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 DCLK1O15075 740 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 LINC01565O15544 149 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 LIASO43766 372 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 B3GALT2O43825 422 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 TSPAN3O60637 253 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 TBL1XO60907 577 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 MOSPD3O75425 235 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 SCAF4O95104 1147 aaKnown RBP4.69□□□□□ -1.66
CDR2-203ENST00000563573 OLFM2O95897 454 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 KRT14P02533 472 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 RHOXF2BP0C7M4 288 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 HK1P19367 917 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 BMP5P22003 454 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 CCNCP24863 283 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 OR1E1P30953 314 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 LSP1P33241 339 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 CCR2P41597 374 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 KCNJ1P48048 391 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 IFNAR2P48551 515 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 NDST2P52849 883 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 VCPP55072 806 aaKnown RBP4.69□□□□□ -1.66
CDR2-203ENST00000563573 YBEYP58557 167 aaPredicted RBP4.69□□□□□ -1.66
CDR2-203ENST00000563573 PHC1P78364 1004 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 ZNF33AQ06730 810 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 SEMA3BQ13214 749 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 ZNF177Q13360 481 aaPredicted RBP4.69□□□□□ -1.66
CDR2-203ENST00000563573 MRPL49Q13405 166 aaKnown RBP4.69□□□□□ -1.66
CDR2-203ENST00000563573 DPYSQ14117 519 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 POLD3Q15054 466 aaPredicted RBP4.69□□□□□ -1.66
CDR2-203ENST00000563573 NOMO1Q15155 1222 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 CYP1B1Q16678 543 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 ERCC6LQ2NKX8 1250 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 ANO4Q32M45 955 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 C5orf22Q49AR2 442 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 NCBP2-AS2Q69YL0 99 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 SYCE2Q6PIF2 218 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 DOK3Q7L591 496 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 C14orf80Q86SX3 495 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 CDKL3Q8IVW4 592 aaPredicted RBP4.69□□□□□ -1.66
CDR2-203ENST00000563573 ARID3BQ8IVW6 561 aaPredicted RBP4.69□□□□□ -1.66
CDR2-203ENST00000563573 YAF2Q8IY57 180 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 CPXM2Q8N436 756 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 CARNMT1Q8N4J0 409 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 PQLC3Q8N755 202 aa4.69□□□□□ -1.66
CDR2-203ENST00000563573 RTL3Q8N8U3 475 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms