RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ANO6Q4KMQ2 910 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 VWA5B1Q5TIE3 1220 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 IZUMO3Q5VZ72 239 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 LCN10Q6JVE6 187 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 ADAMTSL4Q6UY14 1074 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 MARK2Q7KZI7 788 aaKnown RBP7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 STRADAQ7RTN6 431 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 SLC9B2Q86UD5 537 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 TSPAN33Q86UF1 283 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 CUZD1Q86UP6 607 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 LAPTM4BQ86VI4 370 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 GALNT13Q8IUC8 556 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 ZBTB2Q8N680 514 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 TMEM35BQ8NCS4 154 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 NTAN1Q96AB6 310 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 TGM7Q96PF1 710 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 FCRL4Q96PJ5 515 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 PLEKHG4BQ96PX9 1271 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 GSDMAQ96QA5 445 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 AGAP2Q99490 1192 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 HERPUD2Q9BSE4 406 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 CRACR2AQ9BSW2 395 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 ABCG8Q9H221 673 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 STN1Q9H668 368 aaKnown RBP7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 SIX2Q9NPC8 291 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 METTL5Q9NRN9 209 aaKnown RBP7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 RMND1Q9NWS8 449 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 SCHIP1Q9P0W5 487 aaPredicted RBP7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 COPG2Q9UBF2 871 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 APEX2Q9UBZ4 518 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 CNOT8Q9UFF9 292 aaKnown RBP7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 OSGIN2Q9Y236 505 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 KCNK6Q9Y257 313 aa7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 KLF2Q9Y5W3 355 aaPredicted RBP7.62□□□□□ -1.19
HERPUD1-206ENST00000563343 GOLGA6CA6NDK9 693 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 GOLGA6BA6NDN3 693 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 C2CD4BA6NLJ0 364 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 FOXN3O00409 490 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 UBXN7O94888 489 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 CAPN1P07384 714 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 GOLGA6DP0CG33 693 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 FOLR1P15328 257 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 EPHB2P29323 1055 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 CA5AP35218 305 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 GPR1P46091 355 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 VAV2P52735 878 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 NOMO3P69849 1222 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 NSUN2Q08J23 767 aaKnown RBP eCLIP7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 RAPSNQ13702 412 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 TMCO4Q5TGY1 634 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 FAM69BQ5VUD6 431 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 DENND2CQ68D51 928 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 DPY19L2P1Q6NXN4 242 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 Q6ZS92 163 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 TMEM26Q6ZUK4 368 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 MED25Q71SY5 747 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 CHST15Q7LFX5 561 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 NLRP8Q86W28 1048 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 ARFGAP1Q8N6T3 406 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 TMEM102Q8N9M5 508 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 SLC38A9Q8NBW4 561 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 JOSD2Q8TAC2 188 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 GPT2Q8TD30 523 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 ITLN2Q8WWU7 325 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 RXFP2Q8WXD0 754 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 RSC1A1Q92681 617 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 DHTKD1Q96HY7 919 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 SLC41A2Q96JW4 573 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 FAM81BQ96LP2 452 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 MCCC1Q96RQ3 725 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 CHST8Q9H2A9 424 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 GOLGA6AQ9NYA3 693 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 ZNF624Q9P2J8 865 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 EPHA6Q9UF33 1036 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 CD84Q9UIB8 345 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 CNOT6Q9ULM6 557 aaKnown RBP7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 PRKAB1Q9Y478 270 aa7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.61□□□□□ -1.19
HERPUD1-206ENST00000563343 MAP1AP78559 2803 aaPredicted RBP7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 IGHV5-51A0A0C4DH38 117 aa7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 TTC24A2A3L6 582 aaPredicted RBP7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 OR5K4A6NMS3 321 aa7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 F5H423 210 aaPredicted RBP7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 K7ELQ4 463 aaPredicted RBP7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 ATP1A1P05023 1023 aaKnown RBP7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 RAB40ALP0C0E4 278 aa7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 SLC2A4P14672 509 aa7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 BPIP17213 487 aa7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 XRCC1P18887 633 aaPredicted RBP7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 SLC19A1P41440 591 aa7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 PTPN9P43378 593 aa7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 CAPZBP47756 277 aa7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 PAPOLAP51003 745 aaKnown RBP7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 CLCNKAP51800 687 aa7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 PPP1CAP62136 330 aa7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 TUBB3Q13509 450 aa7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 ZNF235Q14590 738 aa7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 KCNAB1Q14722 419 aa7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 CACHD1Q5VU97 1274 aa7.6□□□□□ -1.19
HERPUD1-206ENST00000563343 CERS6Q6ZMG9 384 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms